Peter H. A. Sneath (1923 - 2011)
Word has reached me that Peter Sneath died last Friday at his home in
Leicestershire. He was 87 years old. For a more complete and entertaining
autobiographical
account see page 77 of this Bulletin of Bergeys International Society for Microbial Systematics.
Peter was a medical microbiologist, who, in the late 1950s, began to work on
numerical methods for classifying bacteria. He developed numerical clustering
methods. He soon came into contact with Robert Sokal, who was doing the same.
Together they wrote Principles of Numerical Taxonomy, a widely-noticed
textbook advocating taking a phenetic approach to classification, basing it
on measures of overall similarity rather than any inference of phylogeny.
The smartest thing Sokal and Sneath did was to not fight over who invented
numerical taxonomy, but to join together to promote it (Sneath was first
author on the 1973 revision Numerical Taxonomy).
Peter Sneath with his children, about 1960.
Photo by Joan Sneath, courtesy of the late Peter Sneath
Numerical taxonomy rattled the systematic establishment, then dominated by
followers of Ernst Mayr and George Gaylord Simpson's school of "evolutionary
systematics". It encouraged and stimulated many younger people to look
into numerical approaches. By about 1980 phenetic approaches had been pushed
aside by phylogenetic systematics, but Sneath and Sokal's work is still
regarded by mathematical clusterers as the most important founding work in
their field. The most widely-used of Sneath's methods is the UPGMA
clustering method (independently also invented by F. J. Rohlf). [See comment of September 30 below for correction of this statement].
I always enjoyed meeting Peter and Joan Sneath. Peter was intrigued by any
and all uses of numerical and computer methods in science, and was even willing on occasion to violate his own precepts and come up with methods for analyzing phylogenies.
He wrote a pioneering 1975 paper (with Sackin and Ambler) on detecting
recombination between lineages, for example. I remember Peter telling me that
as he traveled around he collected soil samples to study their bacteria. He
carried no sterile vials for that -- he simply went out and bought a ream of
typing paper, as it was sterile, then used some to scoop up the sample and
fold it into an envelope. It was a brilliant common-sense improvisation
typical of the best of his generation of English scientists.
28 Comments
mplavcan · 13 September 2011
I was trained early on in cladistics, but Numerical Taxonomy was then and now considered a classic, and much of the work is still useful. It is sad to hear that Sneath has passed on. Thanks for the post.
Gary_Hurd · 14 September 2011
My anthropology dissertation in 1976 referenced Sneath and Sokal, and Hardine and Sibson. Psychologists and linguists had been using clustering and multi-dimensional scaling methods for some time, (such as Johnson's hierarchical clustering but the fortan routines in S&S ran much faster.
Sorry he has died.
Great story about the soil samples. Returning to the US in the early '70s with bags, and vials filled with white, red, or brown powders (in fact mostly clays) was always good for an extra hour with customs agents. I found that if I gave them a copy of my field catalog, and a request form for samples they let me go.
Joe Felsenstein · 14 September 2011
Atheistoclast · 15 September 2011
Dave Luckett · 15 September 2011
Cripes, this is just getting weird.
Atheistoclast · 15 September 2011
Dave Lovell · 15 September 2011
Joe Felsenstein · 15 September 2011
Dave Luckett · 15 September 2011
Campaigning to have him removed!
That goes alongside the "my mission is to destroy atheism" in the goober file. This guy is Dagenham - he's out beyond Barking.
Joe Felsenstein · 15 September 2011
Atheistoclast · 15 September 2011
This comment has been moved to The Bathroom Wall.
apokryltaros · 15 September 2011
This comment has been moved to The Bathroom Wall.
apokryltaros · 15 September 2011
This comment has been moved to The Bathroom Wall.
DS · 15 September 2011
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mplavcan · 15 September 2011
This comment has been moved to The Bathroom Wall.
Joe Felsenstein · 15 September 2011
Sorry for the delay in acting, folks, I was away from my computer.
In response to one question about Sneath: he retired at the normal age in 1989, as was explained in the 2010 article which I linked to in the post. As to whether people (like me, for example) are continuing to work past retirement age because we are terrified of yielding our post to younger folks who would agree with the Discovery Institute ... please discuss that on the Wall. If at all.
I realize that people here did not know Peter Sneath, and are not that involved in, or aware of, the work on phylogenies and systematics. So I don't expect this memorial thread to go far, but I will patrol (or should I say "patroll") it against rampant diversionary nonsense.
John · 15 September 2011
Joe -
I had read some of Sneath's papers in graduate school and did peruse Sokal and Sneath once. Am surprised that virtually no one working in systematics - with maybe one or two exceptions - has posted their condolences here (In the interest of full disclosure, I had studied systematics from cladists. But I think I did have a biostatistician professor who had praised Sneath's work.). You have my condolences on the loss of your old friend and colleague.
Sincerely,
John
Joe Felsenstein · 15 September 2011
Joe Felsenstein · 15 September 2011
And
here is an appreciation of the impact of Peter Sneath's work by University of Connecticut evolutionary biologist Kent Holsinger.
Joe Felsenstein · 16 September 2011
... and here is a brief notice by his University of his death, mentioning some circumstances.
Joe Felsenstein · 16 September 2011
... and searching more carefully gives dozens of sites that mention his death. Unfortunately with the exception of the ones mentioned above, all of them start out "Word has reached me ..."! Most are anticreationist or science-promoting sites just putting in a link to PT.
As for the rest, Grrr ...
Joe Felsenstein · 16 September 2011
Here's one that's different, and not in response to Peter's death. A book review of the book Naming Nature: The Clash Between Instinct and Science (2009) by Carol Kaesuk Yoon, in which she is quoted and paraphrased as saying that Sokal and Sneath's method of numerical taxonomy carried us away from a real appreciation of nature. An implicitly negative assessment.
Yoon's book is a popularized account of developments in taxonomy and systematics (including molecular systematics), not heavy on details. Using Google Books I found that Sokal and Sneath's work is mentioned on
a series of pages from page 195-227, and Google Books will let you see the text for most of these mentions.
Joe Felsenstein · 30 September 2011
Bob Sokal, Peter's co-thinker, has contacted me. He thanked me for this obituary post. He also corrected me about the invention of UPGMA clustering. He says that he invented it about 1953. Peter Sneath invented single-linkage clustering (probably the next most-widely-used method). However, I think UPGMA was not actually published until Rohlf's thesis of 1962 and a paper by Peter Sneath in that same year.
Joe Felsenstein · 5 April 2012
Here is an appreciation of Peter by Mike Stevens, a microbiologist who once worked for Peter and who knew him for many years.
Joe Felsenstein · 5 April 2012
Michael Goodfellow, of the University of Newcastle, has published
a good and appreciative obituary at the web site of the Society of General Microbiology.
Joe Felsenstein · 16 April 2012
At the plant systematics journal Taxon is this very good appreciation of Peter's influence by Daniel Barker, who acknowledges that he never met Peter. It can be accessed freely (sometimes).
Joe Felsenstein · 28 June 2012
Daniel Barker sends along the following correction of his article:
Thank you again for your link to my tribute to Peter Sneath from Panda's
Thumb (in your comment of 16 April).
Readers of the journal kindly pointed out that a caption incorrectly
identified Rogers McVaugh as 'M.C. Vaughn'. I mention this in case you
might wish to also add a link to the erratum, which is freely available:
http://www.ingentaconnect.com/content/iapt/tax/2012/00000061/00000003/art00
029
I am keen to spread the correction around, to a reasonable extent,
particularly since the mis-labelling also appears elsewhere:
(Sneath 2010,
Bulletin of BISMiS 1: 77-83, http://www.bergeys.org/bismisbulletinissuesv1.html ).
Joe Felsenstein · 20 April 2014
The University of Leicester has published a more extensive obituary of Peter Sneath, written by Dorothy Jones and Bill Grant. It emphasizes both Peter's work on numerical taxonomy and his work on bacterial classification.