We get mail

Posted 10 June 2011 by

Recently the PT crew received an email with the subject line "A legitimate question about Evolution with no agenda." As you might expect, the dual disclaimers--"no agenda" and "legitimate"--immediately raised a few eyebrows. "No agenda"? Hmmmmm. Well, I suppose it's possible, though numerous previous encounters with creationists' faux naivete have left me a dab cynical. The email reads
Subject: A legitimate question about Evolution with no agenda Date: Sun, 5 Jun 2011 16:48:13 -0700 From: [redacted] To: thecrew@pandasthumb.org Dear Panda's Thumb crew: I'm not a scientist, I'm a retired history teacher with a masters in that field. I'm not writing because I have any agendas. I'm trying to get my questions answered and I'm having trouble doing it since I don't know any evolutionary biologists whom I could ask. Those I have written to do not reply. I'm asking for the perspective of an evolutionary biologist who might answer a student with questions who is not hostile to evolutionary biology. If you don't have the time to reply, or don't want to, please write me and tell me that. Here are my questions about macroevolution. My goal is to understand how scientists explain how macro-evolution works in a real life situation, in this case between reptiles evolving into birds, since this is postulated as occurring: *Reptiles Birds* Lay eggs lay eggs fly fly have feathers? have feathers cold blooded? warm blooded Would being cold blooded show up in the fossil record? If not, how and why would a reptile adapt over millions of years into warm-blooded? How would anyone know whether a feathered reptile was now a bird if one is/may be cold blooded and one is warm blooded? Where is the proof? Same topic different question: We know that horses and donkeys can interbreed to produce a mule, which is sterile. Using this explanation for cross breeding, how does that fit with macroevolution? In other words, could a flying, feathered semi-reptile mate with a full bird (or any other combination), and not be sterile? Even over millions of years, since there would be no progeny and the variant would die. Third question: If a reptile/bird evolved, wouldn't it also need a reptile/bird to mate with to carry on the new species? If one, a male, for instance evolved, and no female evolved at the same time and in the same place, wouldn't that end the cycle of macroevolution? Thank you for your time. Sincerely,
You see the difficulties, and it seems clear why the evolutionary biologists to whom he claims to have written haven't bothered to reply. I see three main reasons. First, while our correspondent claims to have no agenda, the general tenor and content of the questions suggests otherwise. While he may be telling the truth, the questions have a distinctly creationist flavor and over the years I've learned to be wary of such self-professed innocence. Like all who have been in this game for a couple of decades, I've seen it before too often. But we'll go on anyway. Second, a number of the specific questions are underlain by misconceptions about science in general and biology in particular that render them incoherent. In order to address the incoherent questions one would first have to address the underlying misconceptions. Most working evolutionary biologists don't have that kind of spare time. (John Scalzi has some apposite remarks in a somewhat different context.) Finally, to all appearances our correspondent has expended little effort to find answers for himself. An easy and obvious way of responding is by pointing the correspondent to some web resources. For example, there's the Berkeley evolution site which is rich in resources for learning about evolution. Then there are search engines for the processional literature. For example, a search on Google Scholar for [birds dinosaurs evolution] produces 25,600 hits. Searching on [evolution endothermy birds] produces 4,860 hits. On the first page of each search there are several useful and trustworthy references. (I emphasize that these are Google Scholar searches, not plain Google searches.) And of course there's PubMed, where both searches get some hits mostly having to do with genetic, metabolic, or molecular research. Of course, the reader has to exercise some judgment in discriminating among the Google Scholar hits, and a long-time teacher like our correspondent should know that. But there's no indication in his email that our correspondent has looked for answers on his own; he wants a working professional to take the time to spoon-feed him. I hope that in his teaching career he taught students do a better job of self-directed research than he's done here. I won't attempt a comprehensive answer to the questions here. Doing so would require require tens of thousands of words, most of them devoted to clearing away the underbrush of misconceptions ("proof"?) and I prefer that our correspondent do some of his own work. Rather, I'll address just a few of the misconceptions underlying the questions and provide some resources so he has a leg up on the work necessary to find answers if he's as genuinely interested as he claims to be. Consider the second and third sets of questions in the email. Our correspondent asks
Same topic different question: We know that horses and donkeys can interbreed to produce a mule, which is sterile. Using this explanation for cross breeding, how does that fit with macroevolution? In other words, could a flying, feathered semi-reptile mate with a full bird (or any other combination), and not be sterile? Even over millions of years, since there would be no progeny and the variant would die. Third question: If a reptile/bird evolved, wouldn't it also need a reptile/bird to mate with to carry on the new species? If one, a male, for instance evolved, and no female evolved at the same time and in the same place, wouldn't that end the cycle of macroevolution?
Shades of Kirk Cameron and Ray Comfort and their crocoduck!. PZ Myers dealt with the 'where's the mate?' topic a couple of years ago. Those questions illustrate three common misconceptions. First, of course, they presuppose that speciation occurs only in giant steps--a 'reptile' morphed into a 'reptile/bird' and thence into a 'bird' in giant steps, and each new step is so different from its parents and siblings that it couldn't breed with them. Second, they illustrate typological thinking, the notion that an individual must be a member of one or another crisp class and that there's a chasm between the classes. Third, they illustrate a pervasive Inability to think in population terms. In general, populations evolve, not a single individual. Our correspondent uses the singular--"reptile" and "bird"--which masks the reality that (in the cases he cites, at least) it's populations that evolve. Let me expand just a bit in hopes that our correspondent reads this; I've notified him of this post. For the most part, animal evolution occurs incrementally in populations First, I ask our correspondent to consider this: Every generation of a sexually reproducing population is a member of the same species as its immediate parent generation, and yet after many generations--hundreds or thousands of generations or more--the last generation of the sequence of generations could be a different species than the first generation. The correspondent's questions imply that we must be able to classify one generation (or one individual member of a generation) as a new species, reproductively isolated from its immediate predecessor generation, somewhere along the line of those hundreds or thousands of generations, but that would be an arbitrary labeling decision and would not accurately map the continuity of evolution. It does not recognize the biological reality that the two generations, the parent generation and its immediate offspring generation, are not reproductively isolated--are not members of different species in the sense that the offspring generation surely could successfully interbreed with the immediate parent generation. An expert given the entire generational sequence from dinosaurs to birds would be utterly stumped in trying to find a sharp species boundary between any pair of succcessive generations, and that is precisely the point (this very appropriate formulation stolen from Andrea Bottaro of the Thumb). Natura non facit saltus, while not universally true, is a good rule of thumb in evolution, whether via natural selection or genetic drift. If our correspondent understands that he'll be on his way to understanding why his questions make little sense. Consider an obvious analogy. There was never a time when a child in an ancient Vulgar Latin-speaking population could not converse with its parents and siblings and peers in a mutually comprehensible language (teenagers' slang aside!), yet over centuries/generations the (geographically dispersed) population of Vulgar Latin speakers incrementally diverged into separate populations of Italian speakers, French speakers, Spanish speakers, Portugese speakers, and speakers of dozens of other Romance languages. Today, after many centuries/generations, those languages are largely mutually incomprehensible (and many are extinct, along with--AFAIK--the original Vulgar Latin) yet there was never a time when a pair of Vulgar Latin-speaking parents suddenly produced a Latin/Spanish-speaking child unable to comprehend its parents' or siblings' language. Over centuries/generations the languages (populations) diverged until they became mutually incomprehensible (they 'speciated'), but there was never a time when an offspring generation couldn't speak with its parent generation. About that giant-step speciation In general, speciation occurs incrementally as two populations diverge over lots of time/generations. If a subpopulation becomes isolated from its parent population, say by some geological event, then over time/generations (via natural selection and/or processes like founder effects and genetic drift) the isolated subpopulation may incrementally diverge from the original parent population. If the isolation is extended, that incremental divergence can widen and may result in speciation in the sense that if the geological barrier is subsequently eliminated, the two populations will have become sufficiently different as to no longer successfully interbreed, and the subpopulation would then be classified as a new species (on the Biological Species Concept definition of "species"). However, there are exceptions. Speciation may not necessarily require geological or geographic isolation. For example, sympatric speciation may be occurring in Rhagoletis pomenella right now in my backyard (I have both apple trees and haws there). See here for a recent genetic analysis of the two populations. The "races" (subspecies?) of R. pomenella are becoming reproductively isolated by their different hosts, and host-related behavioral and genetic changes are accompanying and producing that reproductive isolation, leading to incipient speciation. But for a contrary view see this recent paper for data that contradict the hypothesis that the host-shifting radiation of R. pomonella is due just to recent sympatry but rather is likely based on long-standing genetic variation generated allopatrically in the deeper past. So while the radiation of subpopulations in the (sexually reproducing) R. pomonella instance is recent, it may have deeper genetic roots produced by geological/geographic separation. For another candidate instance of sympatric speciation see here (PDF). (See also here; hat tip to Wesley Elsberry for flagging it to me.) I'll also mention that in spite of our correspondent's mule example, not all hybrids are sterile, and hybridization is one way speciation can occur. But that's a side issue. In some circumstances speciation can occur in a single step of a single individual offspring if the organism can reproduce itself without benefit of sexual interaction with other members of the species. That's not uncommon in plants--polyploidy in self-fertilizing plants can give rise to a new species in one step of a single offspring--and (more rarely) it can happen in parthenogenic animals. A Google Scholar search on [polyploidy speciation] turns up 11,400 hits while a search on [parthenogenic speciation] gets 5,740 hits. Just last month I wrote a brief note on the rapid creation in the laboratory of a new species of parthenogenic whiptail lizard. But no one argues that the evolution of birds from small carnivorous dinosaurs occurred in one step via polyploidy. It was an incremental process over many tens or hundreds of thousands of generations. A professional review by Kevin Padian (though a tiny bit dated) is here (PDF). It's worth noting that the review addresses in passing our correspondent's question about endothermy and fossils. For a fairly recent pop-science overview of the evolution of endothermy in general see here. There's much more that could be said, of course. While our correspondent focuses exclusively on the fossil evidence for 'macroevolution' of birds from reptiles, the most powerful evidence for "macroevolution" is from comparative genetics and molecular biology, and a complete answer would require considerable expansion of that evidence. Fossils aren't irrelevant, of course. Donald Prothero's Evolution: What the Fossils Say and Why It Matters has a dozen pages in Chapter 12 on the evolution of birds. But there are other examples, too. Take, for instance, the evolution of mammals. So continuous is the fossil record of the transition from reptiles to mammals that we're reduced (again!) to an almost arbitrary separation, with mammal-like reptiles on one side of the transition and reptile-like mammals on the other. It's disappointing to have to respond like this to one who has the academic credentials our correspondent claims. While I have not publicly identified the correspondent here, some research (well, single-digit seconds of Googling) found him, and judging from his writings elsewhere on the web he's not quite as agenda-free as he claims. But never mind. Just some modest effort and the URL of Google Scholar would have provided him with the professional resources to address the questions, and the URLs of the Berkeley/NCSE evolution site or the TalkOrigins Archive would provide the background necessary for a lay person to understand the misconceptions underlying our correspondent's questions. But that requires intellectual effort, and there's no evidence that our correspondent has expended that effort. This post is over 2,000 words now and it barely scratches the surface of our correspondent's misconceptions . I hope it's enough to stimulate him to do his own research and thinking, but I have to say I'm not optimistic.

215 Comments

mrg · 10 June 2011

I did my own shot on this at:

http://www.vectorsite.net/taevo.html

If you like, pass that back to him, and he can give me feedback, which I would find interesting. Unless, of course, he just wants to play games, in which case I will immediately put a block on his email.

cwj · 10 June 2011

Well, whether you corespondent learned anything or not I enjoyed reading it, so thanks.

mrg · 10 June 2011

OK, after following up the link, I will just HAVE to read Scalzi's OLD MAN'S WAR. I will buy it from Amazon and he will get the royalty. Even if I don't like it, I owe him that much.

RBH · 10 June 2011

mrg said: I did my own shot on this at: http://www.vectorsite.net/taevo.html If you like, pass that back to him, and he can give me feedback, which I would find interesting. Unless, of course, he just wants to play games, in which case I will immediately put a block on his email.
That's a great resource. Thanks! I've invited the questioner to this comment thread; we'll see.

mrg · 10 June 2011

RBH said: That's a great resource. Thanks!
Why, thank you, though it does need some work -- and nobody reads it. Google competition too great I should think. My INTRODUCTION TO RADAR TECHNOLOGY, in contrast, top of the charts -- which is really not all that surprising because there's maybe three other competing documents on the internet, and they're sketchy. A distinction sort of like being the tallest building in Loveland, Colorado ... which, to no surprise for those familiar with the Great Plains, is the crop silo.

Frank J · 10 June 2011

Finally, to all appearances our correspondent has expended little effort to find answers for himself.

— Richard B. Hoppe
In the ~14 years that I have following the "debate" I have seen that odd behavior in everyone from the most committed geocentrist to the "pesudoskeptic" who claims to not accept "creationism" either (yet makes sure not to ask questions of it). I caution that they often do scour the literature, only to give a "gotcha" to anyone who calls them clueless, and to mine data and quotes to spin more incredulity. Then when you ask them questions about their "theory" most refuse to answer any, and all eventually evade the questions. Many also demand links that they could easily find themselves - just as they found the person to "debate."

Just Bob · 10 June 2011

mrg said: OK, after following up the link, I will just HAVE to read Scalzi's OLD MAN'S WAR. I will buy it from Amazon and he will get the royalty. Even if I don't like it, I owe him that much.
Old Man's War--read it: interesting premise. The sequels--don't bother. He relies more and more on less and less believable deus ex machina plot devices. Oh, and on topic, I wonder if the history teacher disputes that horses and donkeys share a common heritage. One must be a pretty hard-core creationist to insist that they're separate "kinds," yet they can no longer interbreed. How about Irish wolfhounds and teacup poodles? Is there anyone who doubts that they were bred from a common ancestor? Yet they're morphologically so separated now that they can't mate with each other. Artificial insemination? Possibly, if the dam is the wolfhound.

mrg · 10 June 2011

Just Bob said: Old Man's War--read it: interesting premise. The sequels--don't bother. He relies more and more on less and less believable deus ex machina plot devices.
Ah, the story is maintained by an Intelligent Designer: "The scriptwriter did it!"

ckc (not kc) · 10 June 2011

Here are my questions about macroevolution. My goal is to understand how scientists explain how macro-evolution works in a real life situation, in this case between reptiles evolving into birds, since this is postulated as occurring:

*Reptiles Birds*
Lay eggs lay eggs
fly fly

have feathers? have feathers
cold blooded? warm blooded

Would being cold blooded show up in the fossil record?

Possibly. Check out - i.e. google - the relationship between homeothermy/poikilothermy (warm- and cold-bloodedness) and body size, bone structure, anatomy, etc., etc. Keep in mind that the fossil record is incomplete; changes which could be seen in fossils might easily not be, by chance.

If not, how and why would a reptile adapt over millions of years into warm-blooded?

The "if not" is not a logical connection between the previous question and this one. Be that as it may, information about the potential fitness advantages of warm-bloodedness may also be easily googled (the "why"). Keep in mind that there are plenty of (presumably) well adapted cold-blooded species still extant. There's no reason why reptilian ancestors of modern warm-blooded species would not, over millions of years, accumulate changes in their metabolism to allow them to become warm-blooded (and thus no longer reptiles) (the "how").

How would anyone know whether a feathered reptile was now a bird if one is/may be cold blooded and one is warm blooded?

As Richard has explained in the post, the "now a bird" part of this question is often meaningless, or arbitrary (in the predominant cases where the changes such as those from cold-blooded to warm-blooded, scaled to feathered, etc. are gradual ones).

Where is the proof?

Proof of what? And bear in mind that science doesn't deal in proof, but preponderance of evidence. The evidence is that there were feathered "reptiles".

Same topic different question: We know that horses and donkeys can interbreed to produce a mule, which is sterile. Using this explanation for cross breeding,

This is not an "explanation" for "cross breeding", as stated.

how does that fit with macroevolution?

Sterile offspring of interspecific matings do not lead to evolution. Or to macroevolution (however you may wish to define it). Except for the rare parthenogenetic or clonal species as Richard has pointed out. If mules could reproduce asexually - voila! macroevolution.

In other words, could a flying, feathered semi-reptile mate with a full bird (or any other combination), and not be sterile? Even over millions of years, since there would be no progeny and the variant would die.

Richard has dealt with this nicely.

Third question: If a reptile/bird evolved, wouldn’t it also need a reptile/bird to mate with to carry on the new species? If one, a male, for instance evolved, and no female evolved at the same time and in the same place, wouldn’t that end the cycle of macroevolution?

Again, Richard has answered this nicely. Reptile/birds did, of course evolve (that is, there were transitional forms between cold-blooded, non-feathered ancestors of birds and the extant warm-blooded feathered species). They mated nicely among their variable populations on their gradual evolutionary path. The cycle of macroevolution is ... who knows what.

Henry J · 10 June 2011

On a side note about the warm-blooded vs cold-blooded question - as I understand it, crocodiles are cold-blooded descendants of warm-blooded species. The evidence is that their bodies have equipment that makes sense for self-heating bodies but doesn't make sense for bodies whose ancestors never had that feature.

Stanton · 10 June 2011

Henry J said: On a side note about the warm-blooded vs cold-blooded question - as I understand it, crocodiles are cold-blooded descendants of warm-blooded species. The evidence is that their bodies have equipment that makes sense for self-heating bodies but doesn't make sense for bodies whose ancestors never had that feature.
I thought crocodilians are warmblooded, though, inefficiently warmblooded, what with them having diaphragms and relatively large bodies that retain body heat.

Scott F · 10 June 2011

The best extant example of the connectedness of the generations between species are "ring species". Ring species should be real clinchers to fence sitters of speciation.

Scott F · 10 June 2011

The one problem I have is between chimps and humans. I can understand the ebb and flow of point mutations in a population, or other small "reversible" mutations. But that merging of chromosomes thing seems to me to be a real problem. That seems to me to be a unique, once in an eon event that is unlikely to be repeated.

I presume that, all other things being equal, having ones' genes arranged in a different number of chromosomes might not be a problem for successful reproduction. I presume that the machinery of cellular reproduction is probably flexible enough to allow that, and to match up the necessary genes when needed. (I recall reading about living adults who don't have the normal number of chromosomes, so it clearly can happen.)

Similarly, introns seem to be unique, one-off events which, from a naive perspective, would require a similar "match" in a sexual partner to successfully be passed on.

I presume that the spread in a population of both introns and any rearrangement of genes in chromosomes could be accounted for by "genetic drift"? Or "neutral drift"? (whatever the term is). Such unique yet non-fatal mutations could be passed on as recessive genes to succeeding generations, until they actually became useful.

Are those reasonable presumptions? Is that an approximately reasonable layman's perspective?

Thanks.

Just Bob · 10 June 2011

I believe it was Robert Bakker who made a strong case for at least some dinosaurs being warm-blooded. And part of his case WAS fossil evidence--microscopic structure in dinosaur bone that looked more like the bone of warm-blooded animals than that of cold-blooded ones, IIRC.

John Kwok · 10 June 2011

Just Bob said: I believe it was Robert Bakker who made a strong case for at least some dinosaurs being warm-blooded. And part of his case WAS fossil evidence--microscopic structure in dinosaur bone that looked more like the bone of warm-blooded animals than that of cold-blooded ones, IIRC.
No, it wasn't Bakker - though he did publicize it and cited other evidence, such as comparisons of predator/prey ratios in dinosaurs with those of mammals - who originally made a strong case. It was his undergraduate mentor, John Ostrom, who did, having discovered Deinonychus in the mid 1960s (Based on his detailed examination of Deinonychus's skeleton, Ostrom realized that he was dealing with a far more active dinosaur than what others had contended for decades.) and then, approximately a decade later, revived the dinosaur ancestry of birds hypothesis first proposed by Thomas Henry Huxley. We know now that birds are highly derived coelurosaur dinosaurs (http://www.ucmp.berkeley.edu/diapsids/saurischia/coelurosauria.html) distantly related to gigantic "cousins" like Albertosaurus and Tyrannosaurus.

Dave Wisker · 10 June 2011

Scott F said: The one problem I have is between chimps and humans. I can understand the ebb and flow of point mutations in a population, or other small "reversible" mutations. But that merging of chromosomes thing seems to me to be a real problem. That seems to me to be a unique, once in an eon event that is unlikely to be repeated.
It was most likely unique, ocurring in a single individual.
I presume that, all other things being equal, having ones' genes arranged in a different number of chromosomes might not be a problem for successful reproduction. I presume that the machinery of cellular reproduction is probably flexible enough to allow that, and to match up the necessary genes when needed. (I recall reading about living adults who don't have the normal number of chromosomes, so it clearly can happen.)
The type of rearrangement with Human Chromosome 2 is a special kind of Robertsonian translocation called a centric fusion. In mammals, centric fusions often have little or no effect on the fertility of the offspring of individuals whose chromosome numbers differ by that fusion. In humans, the negative effect of centric fusions on the fertility of heterozygotes is minimal, approximately 10%.
I presume that the spread in a population of both introns and any rearrangement of genes in chromosomes could be accounted for by "genetic drift"?
In the case of Human Chromosome 2, not entirely. It’s true that , all other things being equal, chromosome rearrangements whose heterozygote is selected against, even only mildly, can spread only via drift. However, in human females, fusions are preferentially passed to the eggs during oogenesis (a phenomenon known as ‘meiotic drive’), which offsets the selection against the heterozygote considerably.. In addition, populations that are subdivided into local breeding groups (called ‘demes’) increase the probability that the rearrangement will become fixed in one subpopulation. If there is a high level of local extinction and recolonization among these demes, the probability of the rearrangement spreading from the deme in which it has become fixed and eventually becoming fixed is enhanced. Paleoanthropological work has shown that the human lineage, for most of its history, possessed almost the ideal structure for the fixation of this kinmd of fusion. Hope this helps.

Henry J · 10 June 2011

I presume that the spread in a population of both introns and any rearrangement of genes in chromosomes could be accounted for by “genetic drift”? Or “neutral drift”? (whatever the term is). Such unique yet non-fatal mutations could be passed on as recessive genes to succeeding generations, until they actually became useful.

It might be drift, or it might be situated near other DNA that does have some advantage. Or for all I know, a rearrangement might sometimes be of some selective advantage; I wouldn't assume that such can't happen.

Deklane · 10 June 2011

I was transferring some of my old laserdiscs to DVD the other night, in particular the four-part THE DINOSAURS! series made for PBS in the early '90s. That's where Bakker (if I remember right) made a popular-level presentation on dinosaur bone structure and the predator-prey ratio pointing to warm-bloodedness in dinosaurs. This might be what gets remembered, no matter who originally worked it out?

robert van bakel · 10 June 2011

I'm not an anti-religionist, and have no anti-religionist agenda you understand, but I do have some questions which I should like the religionist community to address.

Now, the world is how old? And please, a little more evidence than a re-re-re-translated text would be welcome.

If fish were not the ancestors of amphibians, and these did not evolve into reptiles, birds and mammals, over hundreds of millions of years, what is your brilliant idea? (Please, remember, the Book has already been excluded as physical evidence, you need to do better.)

As I said, I have no axe to grind, I am merely interested in truth, hearing Both Sides, and letting the populace decide.

Mr Hoppe, did this coward add his name to this tripe, or like most religionists, did he/she/it hide behind annonimity?

Mike Elzinga · 10 June 2011

Second, a number of the specific questions are underlain by misconceptions about science in general and biology in particular that render them incoherent. In order to address the incoherent questions one would first have to address the underlying misconceptions. Most working evolutionary biologists don’t have that kind of spare time. (John Scalzi has some apposite remarks in a somewhat different context.)

Reading Scalzi’s comments brought back memories from many years ago when some guy tracked me down and wanted some free advice on building a “free energy machine” of some sort. He said he had this idea and wanted me to explain how he should build it. (I guess most physicists get one of these characters from time to time.) I told him it wouldn’t work; it really made him mad.

Glen Davidson · 11 June 2011

Why isn't that person asking something honest, like how we know that birds evolved from non-bird reptiles?

I'm not certain that an agenda is being pursued by this individual, but it clearly follows the agenda of pseudoscientists.

Here's a question: How are the fossil record, genetics, and morphology explained without evolution ("macroevolution" as IDiots call it)?

I'd like to see this purported retired history teacher fall for such BS if plagiarism were detected in a student's work. The student can ask, "How do you account for the changes that you see between my work and what I supposedly copied? If you can't explain the psychological and cognitive causes of the differences between the two, you haven't shown derivation."

Is anyone stupid enough to believe that? Then why are so many stupid enough to believe that if we don't explain everything in evolution, derivation hasn't been demonstrated (or for Behe, derivation has been shown by the predictions of evolution that he doesn't actually accept as limitations)? Clearly because they're unwilling to accept the obvious evidence, not because they're really that dumb (well, not most of them).

And why would this person expect anyone to answer very basic misconceptions about evolution, like the Ray Comfort-type belief in the doctrine of a separate evolution of males and females?

Crack a book for once, or at least surf the web for answers, lazy unthinking person.

Glen Davidson

cronk · 11 June 2011

The idea that the chimp/human chromosones merged is fascinating, but can you explain this to the layman? I don't understand Dave Whiskers comment re. a single individual, it seems like the creationist crocaduck.

John Kwok · 11 June 2011

Deklane said: I was transferring some of my old laserdiscs to DVD the other night, in particular the four-part THE DINOSAURS! series made for PBS in the early '90s. That's where Bakker (if I remember right) made a popular-level presentation on dinosaur bone structure and the predator-prey ratio pointing to warm-bloodedness in dinosaurs. This might be what gets remembered, no matter who originally worked it out?
Maybe in the popular imagination, but it was John Ostrom who recognized that dinosaurs were far more active creatures - not the plodding, slow-moving variety depicted by artist Charles R. Knight or captured as such in countless Hollywood films from the 1920s until the early 1970s - based on his substantial examination of Deinonychus's bones. This led him to look anew at Huxley's dinosaur to bird hypothesis by examinating Archaeoptyerx, and concluding that it was a coelurosaur dinosaur. I don't deny that Bakker did much to promote the renaissance in dinosaur paleobiology - both in the public imagination and in science (part of the reason too was that Bakker was - and still is - a great artist as well a writer) - but there are others who have made more important contributions, not the least of which was his Yale University undergraduate professor of vertebrate paleontology, John Ostrom.

John Kwok · 11 June 2011

John Kwok said:
Deklane said: I was transferring some of my old laserdiscs to DVD the other night, in particular the four-part THE DINOSAURS! series made for PBS in the early '90s. That's where Bakker (if I remember right) made a popular-level presentation on dinosaur bone structure and the predator-prey ratio pointing to warm-bloodedness in dinosaurs. This might be what gets remembered, no matter who originally worked it out?
Maybe in the popular imagination, but it was John Ostrom who recognized that dinosaurs were far more active creatures - not the plodding, slow-moving variety depicted by artist Charles R. Knight or captured as such in countless Hollywood films from the 1920s until the early 1970s - based on his substantial examination of Deinonychus's bones. This led him to look anew at Huxley's dinosaur to bird hypothesis by examinating Archaeoptyerx, and concluding that it was a coelurosaur dinosaur. I don't deny that Bakker did much to promote the renaissance in dinosaur paleobiology - both in the public imagination and in science (part of the reason too was that Bakker was - and still is - a great artist as well a writer) - but there are others who have made more important contributions, not the least of which was his Yale University undergraduate professor of vertebrate paleontology, John Ostrom.
Deklane, as a postscript, I'm not sure if dinosaur bone structure is still regarded as a key indicator of endothermy (Hopefully someone who has a more substantial background in vertebrate paleobiology than yours truly, will chime in.). Please note that in lieu of "examinating" I meant to say examining.

Dave Wisker · 11 June 2011

cronk,
cronk said: The idea that the chimp/human chromosones merged is fascinating, but can you explain this to the layman? I don't understand Dave Whiskers comment re. a single individual, it seems like the creationist crocaduck.
Sorry about that, but frankly, it's not a subject easy to condense into a single comment, let alone make comprehensible to a layman. It involves two highly technical disciplines, cytogenetics and population genetics, both of which have their own arcane terminology. But let me summarize with as little technical detail as possible. The fusion that resulted in Human Chromosome 2 (HC2) involved two chromosomes breaking at their extreme ends(in an area known as the telomeres) and joining together, end-to end, with the little end fragments being lost. The telomeric regions don't contain any genes, so this particular fusion did not result in any potentially fatal or detrimental loss of genomic information. Fusions are a fairly common chromosomal mutation, but end-to-end fusions like this are very rare. So this fusion probably occurred only once, in a single individual’s egg or sperm. When that individual mated, one of its offspring was a hybrid, or heterozygote for the fusion (instead of having 46 or 48 chromosomes, it had 47). Now, many types of chromosome rearrangements have a problem in heterozygotes when it comes time for them to produce gametes (eggs or sperm), because the chromosomes cannot pair up properly during meiosis. They have to contort themselves into odd configurations, and this often prevents the proper number of chromosomes making it into the gametes, and also can result in losses of genetic material during recombination. Typically, heterozygotes for rearrangements can be expected to be semisterile, i.e., suffering a 50% loss of fertility. In evolutionary terms, these heterozygotes suffer a significant loss of fitness, and, under normal circumstances, are not expected to spread and become fixed in a population (fixed means every individual in the population has the mutation). But the fusion that resulted in HC2 is different: because the breaks occurred at the extreme ends of the original chromosomes, when it comes time for the chromosomes to pair up in the heterozygotes during meiosis, the one fused chromosome and the two individual chromosomes can pair up fairly easily without (much) contorting. There is still some effect on fertility, though: studies on the fertility of human heterozygotes for centric fusions in general (not just ones like HC2) show a fertility loss of about 10% at the most. So, in order to spread throughout the population, HC2 had to overcome selection against the heterozygote, at least in the early generations of fixation This is often difficult for laymen to grasp—it seems counterintuitive. After all, shouldn’t natural selection have eliminated the fusion from the population? And yet, it became fixed in the human population despite that! The fixation of chromosome rearrangements which are selected against as heterozygotes is a classic problem in population genetics, because there are many examples of rearrangements becoming fixed in lineages of numerous organisms. It has fascinated population geneticists like Sewall Wright, Russell Lande, and Phil Hedrick who have shown the conditions under which the fixation can take place. But I’ll stop here. Does this make at least some sense so far?

Duncan Buell · 11 June 2011

Actually, it wasn't until I read the first chapter of Dawkins's *Greatest Show on Earth* that I understood this, and I would recommend this reading to most laypeople. Dawkins writes about the tendency/desire of people to put things into pigeonholes and discrete categories (he cites this as a version of Platonism) and about the unfortunate (?) reality of biology that things are not easily put into such discrete categories. The argument there is very good. And it is the problem with this guy's argument.

(I would add that after reading this I understood why I had decided to go into math, where things can, except at the base level of foundations, be put into discrete categories.)

mrg · 11 June 2011

Mike Elzinga said: I told him it wouldn’t work; it really made him mad.
"What's your honest opinion on this?" "Won't work." " ... OK, then give me your dishonest opinion instead."

mrg · 11 June 2011

Dave Wisker said: But I’ll stop here. Does this make at least some sense so far?
Forgive minor sniping at what is clearly an expression of good sense, but it would make more sense with paragraph breaks.

Frank J · 11 June 2011

Hope this helps.

— Dave Wisker
Thanks, it does. While the chromosome fusion itself is dramatic evidence of common ancestry (unless one plays the game that the alternative is "I don't know"), the "how" is hard to explain, even to many of us with a background in science. If I may stray a bit more from the topic, this example will always remind me of a Ken Miller talk I saw in 2009. The audience of several hundred included many college science majors and others well-versed in evolution. So it was far from representative of the general population. I was shocked that only ~1/4 of them raised their hand when Miller asked if they were aware of this example!

harold · 11 June 2011

Dave Wisker - Thanks very much for your excellent comments about human chromosome 2. Moving on, I can't help responding to some of the questions from the original post.
Would being cold blooded show up in the fossil record?
We can't measure the body temperature of a long dead organism, but the reasonable answer here is "yes, to fair degree of certainty, in many cases". We have many examples of poikilotherms and homeotherms living on the earth right now. Furthermore, the level of efficiency of homeothermy is variable. We humans have evolved such that we can, and need to, maintain a very regulated internal temperature, but some animals regulate somewhat, but to a lesser degree. So of course, by extension from what we see in living animals, we can determine whether or not a fossil is from a homeotherm or poikilotherm to varying degrees of accuracy. After all, you'd have to be quite unreasonable to deny that the fossilized remains of a bear are from a homeotherm, or that the fossilized remains of a frog are from a poikilotherm. In the case of some extinct, transitional lineages, it may not be easy to say, and indeed, they may not have fit neatly into either category.
If not, how and why would a reptile adapt over millions of years into warm-blooded?
What do you mean by "if not"? Anyway, moving on to the question - no individual reptile could ever possibly live for millions of years. The scenario you describe is impossible. Of course, what does happen is that reptiles reproduce. When they reproduce, they have descendants. Their descendants always vary slightly relative to the parents. Some of the variation is due to environmental factors, but some is due to genomic variation impacting on phenotype. Some phenotypes maybe selected for or selected against, and if this happens, alleles associated with those phenotypes will increase in the population. Also, some alleles may spread through the population via genetic drift, depending on various factors. At various points, some descendants may branch off into new lineages via a gradual process of genetic isolation from the rest of the population. Via this process, known as "evolution", it is easy to see that traits associated with incrementally more regulation of internal temperature might emerge and be selected for. In addition, it is easy to note that possession of one such trait might predispose toward the positive selection for a second related trait.
How would anyone know whether a feathered reptile was now a bird if one is/may be cold blooded and one is warm blooded? Where is the proof?
This question shows a gross misunderstanding of biology. Imagine if I'm trying to go from AA to BB and I can only change one letter at a time. AA - AB - BB. Now, the left end of this sequence is clearly a pure example of "AA", and the right end is unequivocally an example of "BB". Now imagine that I erase the entity in the middle. AA and BB are clearly distinct from one another. But in fact, there was a transitional step (one, in this very simplified model). There is no need to conjecture that "an AA suddenly gave birth to a BB". It's arbitrary where we draw the line between feathered reptiles and birds, and many people, including me, like to refer to birds as dinosaurs, which is entirely justifiable. There are no examples of difficult-to-classify feathered animals now; as far as I know all feathered animals alive today are clearly birds. But in the past there were animals which had some traits of modern birds and some traits of reptiles that modern birds don't share, and at least some of those were the ancestors of modern birds.
Same topic different question: We know that horses and donkeys can interbreed to produce a mule, which is sterile. Using this explanation for cross breeding, how does that fit with macroevolution?
Horses and donkeys share very recent common ancestry. That's why they have such similar traits and can and will interbreed and produce viable offspring. However, the lineages have diverged sufficiently that they seldom produce fertile offspring. What happened is that, in the "recent" (by evolutionary standards) past, wild horse ancestors and wild ass ancestors became genetically isolated from each other. However, before they had diverged massively, humans came along and domesticated each species (originally a different human culture for each). Truly wild horses are now exceedingly rare http://en.wikipedia.org/wiki/Wild_horse (mustangs and the like are feral domestic horses), and so are wild asses http://en.wikipedia.org/wiki/African_Wild_Ass, and they live in different environments. Whether they might mate with each other if they happened across each other is unknown. However, the production of mules on a large scale is a purely human invention.
In other words, could a flying, feathered semi-reptile mate with a full bird (or any other combination), and not be sterile?
It is highly unlikely that ancient transitional species would theoretically be able to mate with modern birds. Of course, no-one proposes such a thing. What happened is that some reptiles with some bird-like traits could easily mate with some reptiles with incrementally more bird-like traits, for many iterations.
Third question: If a reptile/bird evolved, wouldn’t it also need a reptile/bird to mate with to carry on the new species?
Again, at the level of an individual expressing an incremental phenotypic adaptation due to incremental allelic variation, there is no reason to conjecture that such an individual could not mate with other members of the population.
If one, a male, for instance evolved, and no female evolved at the same time and in the same place, wouldn’t that end the cycle of macroevolution?
No. Individuals do not "evolve". Populations evolve. It is absurd to argue that every individual with an incremental phenotypic adaptation that could be selected for is sterile within its population.

Dave Wisker · 11 June 2011

mrg said:
Dave Wisker said: But I’ll stop here. Does this make at least some sense so far?
Forgive minor sniping at what is clearly an expression of good sense, but it would make more sense with paragraph breaks.
Wow. It was one highly-caffeinated word-dump. Sorry about that.

mrg · 11 June 2011

Dave Wisker said: Sorry about that.
Not a big issue. Just a suggestion.

Dave Wisker · 11 June 2011

There are no examples of difficult-to-classify feathered animals now; as far as I know all feathered animals alive today are clearly birds. But in the past there were animals which had some traits of modern birds and some traits of reptiles that modern birds don’t share, and at least some of those were the ancestors of modern birds.
This is an excellent point, and one often overlooked. The reason we can classify extant organisms at all is that their discontinuities are made possible by the fact that the vast majority of the transitional forms between them are now extinct. As for fossil taxa, the ones we see are most likely the most successful and long-lasting ones; many transitional forms appeared in smaller, shorter-lived populations, and thus are less likely to show up (or at least be found by us) in the fossil record.

Charley Horse · 11 June 2011

QUOTE: "If one, a male, for instance evolved, and no female evolved at the same time and in the same place, wouldn’t that end the cycle of macroevolution?" END QUOTE

Yes, that is known as unicyclism. It wasn't until later when bicyclists
self invented that things really got to hopping/ flying. One of the first
seen in the fossil record was a schwinnasaur. Any questions?

TomS · 11 June 2011

If one, a male, for instance evolved, and no female evolved at the same time and in the same place, wouldn’t that end the cycle of macroevolution?
One standard response to this is to point out that the Romance languages stem from Latin. But how could the French language survive if the first speaker of French did not have anyone to talk with?

RBH · 11 June 2011

One standard response to this is to point out that the Romance languages stem from Latin. But how could the French language survive if the first speaker of French did not have anyone to talk with?
I was regretting not including that very sentence this morning. Nice!

RBH · 11 June 2011

I edited some paragraph breaks into Dave's excellent comment.
Dave Wisker said:
mrg said:
Dave Wisker said: But I’ll stop here. Does this make at least some sense so far?
Forgive minor sniping at what is clearly an expression of good sense, but it would make more sense with paragraph breaks.
Wow. It was one highly-caffeinated word-dump. Sorry about that.

mrg · 11 June 2011

Thank you. It is much more readable now.

Didaktylos · 11 June 2011

mrg said:
Mike Elzinga said: I told him it wouldn’t work; it really made him mad.
"What's your honest opinion on this?" "Won't work." " ... OK, then give me your dishonest opinion instead."
Wouldn't the dishonest opinion be telling him it still won't work after having pocketed ten thousand {currency of your choice}?

Frank J · 11 June 2011

Wow. It was one highly-caffeinated word-dump. Sorry about that.

— Dave Wisker
I actually found it interesting enough that I didn't even notice how long it was. And I hate long paragraphs more than almost everyone, because most of the ones I read come from evolution-deniers on a Gish-gallop.

mrg · 11 June 2011

Didaktylos said: Wouldn't the dishonest opinion be telling him it still won't work after having pocketed ten thousand {currency of your choice}?
Well, you could just tell him a lie; or you could take his money; but if you were smart, you would do both, right? After all, if he paid me 10,000 ***** to lie to him, it would be dishonest of me not to do so.

Frank J · 11 June 2011

Reading Scalzi’s comments brought back memories from many years ago when some guy tracked me down and wanted some free advice on building a “free energy machine” of some sort. He said he had this idea and wanted me to explain how he should build it. (I guess most physicists get one of these characters from time to time.) I told him it wouldn’t work; it really made him mad.

— Mike Elzinga
Pardon another mostly OT post, but I can't resist another attempt at an idea I had 10 years ago but have had trouble putting into words: If someone desperately wants a “free energy machine” you don't have to tell them how it works. Just tell them that the "PV=nRT" that they learned in school is not true, and that that inconvenient fact is censored by the "Newtonist orthodoxy." Then tell them that you advocate that students "critically analyze PV=nRT" in school. As you know it's an excellent approximation that works, both in the real world and in terms of explaining the concept to beginners. But they don't know that, and more importantly, don't want to know that. Thus your goal is to merely promote unreasonable doubt, so the "critical analysis" must be geared toward that end. Luckily for you, the critical analysis of the "critical analysis" will be too complicated, and/or require too much class time to be practical, so in nearly every case you will succeed at promoting unreasonable doubt of PV=nRT. You will be shrewd enough to avoid drawing any attention to other, mutually contradictory, equations that you know don't work at all. But your students won't know that. Instead they'll come away convinced that the “free energy machine” can be built. Then, when they find that they can't build it, they'll join forces with like-minded people and whine about being "expelled."

mrg · 11 June 2011

Frank J said: Then, when they find that they can't build it, they'll join forces with like-minded people and whine about being "expelled."
Well, in a sense we've seen a form of that already: "We would have 100 MPG cars if the auto industry hadn't suppressed them!" There is a certain degree of backwardness in the auto industry that encourages this sort of thinking.

RBH · 11 June 2011

Ha! Jesus and Mo hit it, too.

raven · 11 June 2011

Scott F. But that merging of chromosomes thing seems to me to be a real problem. That seems to me to be a unique, once in an eon event that is unlikely to be repeated.
Completely wrong. Species with multiple karyotypes are quite common. One such is the exotic animal, the horse. Different mouse populations can have widely varying karyotypes. Another is the okapi and IIRC, the European wild pig. Populations with different chromosome numbers due to fusions and splits can arise quite rapidly. They are, at least at first, interbreedable even though there can be a fertility hit.
Island mice may evolve faster: From one species to six By Bijal P. Trivedi April 28, 2000 Janice Britton-Davidian spent several weeks in 1999 placing hundreds of mousetraps all over the semi-tropical island of Madeira and discovered what may be an example of "rapid evolution." She caught hundreds of small brown mice that look pretty much alike but that are genetically distinct—a very unusual thing for such a small, geographically contained place. It normally takes thousands to millions of years for one species of animal to diverge to become two. On Madeira, one species may have evolved into six in the space of just 500 years. Britton-Davidian, an evolutionary biologist at Université Montpellier II in Montpellier, France, showed that populations of Maderian mice have between 22 and 30 chromosomes, even though their ancestors, who first arrived with the Portugese in the 15th century, had 40.

raven · 11 June 2011

wikipedia wild boars: Subspecies subspecies can usually be distinguished by the relative lengths and shapes of their lacrimal bones. S. scrofa cristatus and S. scrofa vittatus have shorter lacrimal bones than European subspecies.[27] Spanish and French boar specimens have 36 chromosomes, as opposed to wild boar in the rest of Europe which possess 38, the same number as domestic pigs. Boars with 36 chromosomes have successfully mated with animals possessing 38, resulting in fertile offspring with 37 chromosomes.[28]

raven · 11 June 2011

ME: Reading Scalzi’s comments brought back memories from many years ago when some guy tracked me down and wanted some free advice on building a “free energy machine” of some sort.
LOL. They never go away. They even have their own journal, Infinite Energy. I once saw someone try to trade a perpetual motion machine for a cold fusion reactor. Not sure which one got the best of that trade.

Stuart Weinstein · 11 June 2011

Didaktylos said:
mrg said:
Mike Elzinga said: I told him it wouldn’t work; it really made him mad.
"What's your honest opinion on this?" "Won't work." " ... OK, then give me your dishonest opinion instead."
Wouldn't the dishonest opinion be telling him it still won't work after having pocketed ten thousand {currency of your choice}?
Kind of reminds of the old Rodney Dangerfield joke. My Psychiatrist told me I was crazy. I said I wanted a second opinion. He said "OK, You're ugly too". rim shot

Klaus H · 11 June 2011

mrg said:
Frank J said: Then, when they find that they can't build it, they'll join forces with like-minded people and whine about being "expelled."
Well, in a sense we've seen a form of that already: "We would have 100 MPG cars if the auto industry hadn't suppressed them!" There is a certain degree of backwardness in the auto industry that encourages this sort of thinking.
There were already 70 MPG cars in the 50s, long before EFI and FEA.

Henry J · 11 June 2011

I once saw someone try to trade a perpetual motion machine for a cold fusion reactor. Not sure which one got the best of that trade.

Huh. Cold fusion didn't work, but as far as I know it wouldn't have violated any conservation laws if it had worked - i.e., it was worth studying at the time in order to find out if it would work or not (it could be quite useful if it had worked).

mrg · 11 June 2011

Klaus H said: There were already 70 MPG cars in the 50s, long before EFI and FEA.
Few Americans would regard an Isetta as truly worthy of being called a "car". It was a nice thing in itself, of course, and I'd sure like to drive one sometime.

MememicBottleneck · 12 June 2011

Mike Elzinga said: Reading Scalzi’s comments brought back memories from many years ago when some guy tracked me down and wanted some free advice on building a “free energy machine” of some sort. He said he had this idea and wanted me to explain how he should build it. (I guess most physicists get one of these characters from time to time.) I told him it wouldn’t work; it really made him mad.
This brought back an old memory for me. During a family gathering in the middle of the Carter gas crisis of the 70's, an uncle wanted to know why cars couldn't have a large wind up spring instead of a motor. The "gas stations" could use the "power take off" (PTO-high torque rotary shaft on rear of all tractors) from a tractor to wind them up. After all, wind up clocks could run for over 24 hours without a rewind. He too was pissed when I told him it wouldn't work. I tried to explain the physics, but his eyes just glazed over when I did.

Frank J · 12 June 2011

Well, in a sense we’ve seen a form of that already: “We would have 100 MPG cars if the auto industry hadn’t suppressed them!”

— mrg
Sure. The first time I posted the "PV=nRT" thing, the replies I got completely missed the intended analogy to teaching "strengths and weaknesses" of evolution. So in case anyone here didn't get it, that's what I mean. If I may elaborate: The strengths are what are taught because they have passed the tests. Even if they are taught in a simplified way, they get the message across. And students are always encouraged to read more on their own time. Anti-evolution activists want students to also learn "weaknesses," which are really misrepresentations designed specifically to promote unreasonable doubt. Even if the "weaknesses" are added to the strengths they would mislead and confuse. But activists generally do not want to add any class time, which means that strengths would get even further diluted than they already are. But none of the anti-evolution activists, and to my dismay, almost none of their critics, ever mentions the weaknesses of the "weaknesses," IOW the refutations of the misrepresentations. They are not the same as the strengths of evolution. But the activists imply that they are, as in "the 'pro' side states its case, then the 'anti' side counters." Yet the critics almost always miss that opportunity to cry "foul." That's because (1) the "debate" invariably gets sidetracked to the religion issue by then, and (2) critics know that to teach strengths, "weaknesses" and weaknesses of "weaknesses" would require an inordinate amount of class time to be counter the misrepresentations in a way understandable to most students. As I have been saying for ~10 years, IMO what the anti-evolution activists demand is dead wrong with or without the religion issue, and whether or not taxpayers pay for it. Which is why I object when someone says "teach it in Sunday School." Sure, we do not have a legal right to ban it there, but we have a right to say that it is morally wrong. Then again, I doubt that many Sunday Schools discuss evolution, let alone misrepresent it. If they discuss Genesis, many (most?) students already know that it needn't be taken literally.

John Kwok · 12 June 2011

Dave Wisker said:
There are no examples of difficult-to-classify feathered animals now; as far as I know all feathered animals alive today are clearly birds. But in the past there were animals which had some traits of modern birds and some traits of reptiles that modern birds don’t share, and at least some of those were the ancestors of modern birds.
This is an excellent point, and one often overlooked. The reason we can classify extant organisms at all is that their discontinuities are made possible by the fact that the vast majority of the transitional forms between them are now extinct. As for fossil taxa, the ones we see are most likely the most successful and long-lasting ones; many transitional forms appeared in smaller, shorter-lived populations, and thus are less likely to show up (or at least be found by us) in the fossil record.
Agreed, but note that some Archosauria (Thecodonts, Crocodilians, Dinosaurs) did not quite fit the definition of what we think of as Reptilia, which cladistics has shown to be a paraphyletic jumble of lineages, with one leading to Mammalia, and another to Aves, and others leading separately to turtles, lizards and snakes, and sphenodonts (sole surviving genus is the living fossil Tuatara).

mrg · 12 June 2011

MememicBottleneck said: This brought back an old memory for me. During a family gathering in the middle of the Carter gas crisis of the 70's, an uncle wanted to know why cars couldn't have a large wind up spring instead of a motor. The "gas stations" could use the "power take off" (PTO-high torque rotary shaft on rear of all tractors) from a tractor to wind them up. After all, wind up clocks could run for over 24 hours without a rewind. He too was pissed when I told him it wouldn't work. I tried to explain the physics, but his eyes just glazed over when I did.
That's good, I like that. Actually, flywheels have been considered as power storage in vehicles, though they have some issues -- weight for one. In the early days of torpedoes, while the rest of the world pursued the Whitehead compressed-air scheme, the Americans focused on the Howell torpedo, which had a flywheel system spun up by air pressure from the launch platform. It actually worked competitively to the Whitehead scheme -- until they added an alcohol burner to the Whitehead system and got range the Howell torpedo couldn't match.

Dave Lovell · 12 June 2011

mrg said: Actually, flywheels have been considered as power storage in vehicles, though they have some issues -- weight for one.
At least for road vehicles, it's a very minor one compared to the safety issues. Unless the system is used for nothing more than energy recovery during braking, the stored kinetic energy is orders of magnitude higher than that of the vehicle moving at top speed. In the event of an collision the flywheel will almost certainly break free and leave the scene of the accident, accelerating rapidly to several hundred miles per hour unless it hits something first.

mrg · 12 June 2011

Dave Lovell said: Unless the system is used for nothing more than energy recovery during braking ...
That's been the primary interest. Actually hydraulic schemes seem to be more popular these days -- hydraulic braking recovery seems to work fairly well for stop-and-go buses, delivery trucks, garbage trucks, and so on. The problem with hydraulics has been ... they tend to leak.

justdisa · 12 June 2011

mrg said:
Klaus H said: There were already 70 MPG cars in the 50s, long before EFI and FEA.
Few Americans would regard an Isetta as truly worthy of being called a "car". It was a nice thing in itself, of course, and I'd sure like to drive one sometime.
I WANT ONE!!! That's fabulous. Thanks for mentioning it. =D

Dave Lovell · 12 June 2011

justdisa said:
mrg said:
Klaus H said: There were already 70 MPG cars in the 50s, long before EFI and FEA.
Few Americans would regard an Isetta as truly worthy of being called a "car". It was a nice thing in itself, of course, and I'd sure like to drive one sometime.
I WANT ONE!!! That's fabulous. Thanks for mentioning it. =D
This was much better. Three-wheelers without reverse gears in the Uk at the time could be driven on a provisional motorbike licence indefinitely. With the forward opening door, this could lead to embarassment with the Isetta if you parked too close to a something in front. You were trapped until someone pushed the car back for you.

Klaus Hellnick · 12 June 2011

justdisa said:
mrg said:
Klaus H said: There were already 70 MPG cars in the 50s, long before EFI and FEA.
Few Americans would regard an Isetta as truly worthy of being called a "car". It was a nice thing in itself, of course, and I'd sure like to drive one sometime.
I WANT ONE!!! That's fabulous. Thanks for mentioning it. =D
Isettas were produced in many countries, by many manufacturers. The most common and most advanced were from BMW. I have been considering getting one and updating it with a modern motorcycle or scooter engine, as well as better suspension and electrics. I think air conditioning could even be added if the roof and body panels and roof were insulated a bit and a thermoelectric cooler was added.

mrg · 12 June 2011

You can find Isettas stateside at cars shows, I've picked up a few shots -- see second row:

http://www.vectorsite.net/gfxpxv_04.html

The 1934 Mercedes roadster in the first row is impressive -- I HATE to think of what it's worth.

mrg · 12 June 2011

Say, RBH, did you ever hear a word from our correspondent? No peep from him here.

Frank J · 12 June 2011

mrg said: Say, RBH, did you ever hear a word from our correspondent? No peep from him here.
Sadly, even if he did post the question innocently, most people would be too embarrased to admit having had all those misconceptions. One reason is that we just don't make it clear enough that we respect that more than if they just went away. Unfortunately RBH found him on the web, and notes "judging from his writings elsewhere on the web he’s not quite as agenda-free as he claims." If that's so, he might show up, but only to spin more incredulity arguemnts and demonstrate the double standard of evidence that screams pseudoscience.

mrg · 12 June 2011

Frank J said: Sadly, even if he did post the question innocently, most people would be too embarrased to admit having had all those misconceptions.
OK, maybe, but my experience with people who ask loopy questions is that they are not the least embarrassed about them at all. If they could be, they would have a good reason for being cautious in asking them in the first place. Look at some of our long-term "green card" visiting trolls. They say any dimwit thing that comes into their heads, it doesn't bother them, in fact since playing the fool is a useful passive-aggressive tactic to annoy people, they find it rewarding.

RBH · 12 June 2011

mrg said: Say, RBH, did you ever hear a word from our correspondent? No peep from him here.
Nope. I emailed him day before yesterday to let him know the post was up.

Frank J · 12 June 2011

OK, maybe, but my experience with people who ask loopy questions is that they are not the least embarrassed about them at all.

— mrg
I should add that the ones who do ask apparently innocent questions, then disappear, are a tiny minority of new posters in my experience. They are greatly outnumbered by (1) "drive-by" trolls who do not even pretend to be genuinely seeking information, and (2) those who return with more "questions," soon making it clear that not even an atom-by-atom account of biological history would make them admit evolution.

mrg · 12 June 2011

Frank J said: .... and those who return with more "questions," soon making it clear that not even an atom-by-atom account of biological history would make them admit evolution.
That's one of the nice things about the evo tutorial I wrote. It's not at all popular, but the size -- 24 chapters -- tends to present an obstacle to such games. If they ask questions, I suggest they read it. If they're sincere, they will be happy to do so, since it was assembled at significant labor to help inform the uninformed. If they come back and clearly haven't bothered with it, I know they're playing games and I get rid of them immediately. If they protest that it's too much for them, I point them to the one-chapter primer I condensed out of it -- one of the pleasing things about that item, incidentally, is that nobody reading it would know creationism existed, there wasn't any space for it. If they come back with more questions, I refer them back to the 24-chapter document. For people with simple tastes, this can be entertaining.

Henry J · 12 June 2011

I'm inclined to guess that most (probably not all) people who actually want information about a subject, but who don't know enough to ask specific questions, would likely look for stuff to read before posting questions on a blog on which they aren't already regulars.

Mike · 12 June 2011

Obviously not innocently asking quesitons, but looking to "debate" by regurgitating anti-science propaganda.

Mike Elzinga · 12 June 2011

Didaktylos said:
mrg said:
Mike Elzinga said: I told him it wouldn’t work; it really made him mad.
"What's your honest opinion on this?" "Won't work." " ... OK, then give me your dishonest opinion instead."
Wouldn't the dishonest opinion be telling him it still won't work after having pocketed ten thousand {currency of your choice}?
Dang, I can be stupid sometimes!

mrg · 12 June 2011

Henry J said: I'm inclined to guess that most (probably not all) people who actually want information about a subject, but who don't know enough to ask specific questions, would likely look for stuff to read before posting questions on a blog on which they aren't already regulars.
Yeah. When I got seriously interested in evo science back in 2006 (thanks to Ann Coulter's rantings on the subject at the time), I went over to the local library and got Dawkins' THE BLIND WATCHMAKER. Although somewhat outdated, it was a very good place to start, and I still have a soft spot in my heart for it. Geez, the Loveland public library is an ordinary, run of the mill public library. If somebody wants to learn the basics of evo science, the materials are easy to find.

Mike Elzinga · 12 June 2011

mrg said: Actually, flywheels have been considered as power storage in vehicles, though they have some issues -- weight for one.
Yeah; the one I like best is when the car heads over the crest of a hill, it rolls over. Oops! Forgot to gimble it.

mrg · 12 June 2011

Mike Elzinga said: Yeah; the one I like best is when the car heads over the crest of a hill, it rolls over. Oops! Forgot to gimble it.
This sort of thing can be a problem in aircraft. The compressor and fan spools in the Pegasus turbofan used on the Harrier jumpjet contra-rotate to make the thing easier to handle on hover.

Ben W · 12 June 2011

I have one short reply:

Thanks for posting this! I used to be in the emailing history teacher's shoes, similarly trying to hear both sides out, but with many questions, and it was a great help to me when people posted explanations.

Moreover.. I was also uneducated and hadn't bothered to fix it. I didn't realize that I was being "rude" (in the sense that I was expecting others to educate me, rather than educate myself) until it was pointed out to me. The OP was both insightful and kind, and rather gently chided the curious history teacher for his rudeness.

Frank J · 13 June 2011

That’s one of the nice things about the evo tutorial I wrote.

— mrg
Where can we find it?

Terenzio the Troll · 13 June 2011

harold said: No. Individuals do not "evolve". Populations evolve. It is absurd to argue that every individual with an incremental phenotypic adaptation that could be selected for is sterile within its population.
Damn the Pokemons! You have no idea how hard it is to explain the correct meaning of "evolution" to my kids after they watched enough of that darn japanese cartoon!

harold · 13 June 2011

Terenzio the Troll said:
harold said: No. Individuals do not "evolve". Populations evolve. It is absurd to argue that every individual with an incremental phenotypic adaptation that could be selected for is sterile within its population.
Damn the Pokemons! You have no idea how hard it is to explain the correct meaning of "evolution" to my kids after they watched enough of that darn japanese cartoon!
Yes, the basic principles of evolution are not that hard to grasp at all, if one has some idea of the basic principles of molecular genetics. However, even with that, and especially lacking that, the human tendency to see things in terms of conscious planning or reaction to the environment by individual organisms gets in our way. Raven - Thanks for the comments on chromosome number. Just for completeness, I will add a few comments about human-like populations and chromosomes. Most of this is probably true for all placental mammals. 1) Gene dosage is very important in human populations. Humans can tolerate some dosage variance for the sex chromosomes, e.g. http://en.wikipedia.org/wiki/Trisomy_X, etc. However, with the autosomes, trisomy or monosomy for a significant portion of the genes on any chromosome is usually fatal. Chromosome 21 is the smallest autosome; trisomy 21 is the only whole chromosome number abnormality not involving a sex chromosome that is not fatal in development or very shortly after birth. However, of course, there is only one genome (present in two copies); it is divided up into chromosomes, but where the divisions are is not that critical, as long as gene dosage is normal. Polyploidy beyond diploidy is common in plants, and some insect species have individuals with haploid phenotypes. None of that is compatible with life in humans. In humans, "genetic imprinting" is also important - it matters, in many cases, whether a copy of a gene came from the mother or the father. Birds and many other species don't have this issue and can show parthogenesis, that also isn't possible in humans.

Frank J · 13 June 2011

Yes, the basic principles of evolution are not that hard to grasp at all, if one has some idea of the basic principles of molecular genetics. However, even with that, and especially lacking that, the human tendency to see things in terms of conscious planning or reaction to the environment by individual organisms gets in our way.

— harold
But before one understands the basic principles of molecular genetics, one needs to grasp the basic concept of molecules, and from what I can tell, only 10% of the people have that. As for "conscious planning," even when teaching chemistry I found it hard to avoid saying things like "the molecule 'wants' to do X."

JASONMITCHELL · 13 June 2011

mrg said: OK, after following up the link, I will just HAVE to read Scalzi's OLD MAN'S WAR. I will buy it from Amazon and he will get the royalty. Even if I don't like it, I owe him that much.
"Fuzzy Nation" is a good read also - central to the plot is the definition of "sapience"

W. H. Heydt · 13 June 2011

JASONMITCHELL said:
mrg said: OK, after following up the link, I will just HAVE to read Scalzi's OLD MAN'S WAR. I will buy it from Amazon and he will get the royalty. Even if I don't like it, I owe him that much.
"Fuzzy Nation" is a good read also - central to the plot is the definition of "sapience"
Or, for that issue, H. Beam Piper's _Little Fuzzy_, which explores the legal ramifications of sapience as well, and how to define it. --W. H. Heydt Old Used Programmer

TomS · 13 June 2011

You guys are talking about deep subjects, when most people don't understand the real basics of evolution, like "populations evolve, not individuals". A lot of the rhetoric against evolution fails to make that distinction.

And don't you realize how many people think that "how come there are still monkeys" presents a real puzzle for evolution? Seriously!

SteveS · 13 June 2011

mrg said:
Mike Elzinga said: Yeah; the one I like best is when the car heads over the crest of a hill, it rolls over. Oops! Forgot to gimble it.
This sort of thing can be a problem in aircraft. The compressor and fan spools in the Pegasus turbofan used on the Harrier jumpjet contra-rotate to make the thing easier to handle on hover.
The gyroscopic effect was a feature of early single-rotary-engined airplanes, which fixed the engine shaft to the frame, and rotated the mass of the cylinders (for cooling) with the prop attached. It made them turn more sharply in one direction (generally to the right) than the other. This behavior significantly affected dogfighting tactics during WW I. Multi-engine/multi-prop planes were built with counter-rotating masses to cancel this tendency. (The Wright Bros. first flyer used a single in-line engine with two counter-rotating props, so it goes back to the beginning of aviation).

raven · 13 June 2011

And don’t you realize how many people think that “how come there are still monkeys” presents a real puzzle for evolution? Seriously!
Well it is. I'm still grappling with the issue of, if Protestants came from Catholics, why are there still Catholics? After that is the real tough one. If humans came from dirt, why is there still dirt?

mrg · 13 June 2011

SteveS said: Multi-engine/multi-prop planes were built with counter-rotating masses to cancel this tendency.
Not always. The DH Mosquito didn't have "handed" engines. The P-38 Lightning did ... one of the consequences of this was that if it lost an engine on takeoff, a pilot who didn't know how to react was likely to try to compensate by revving up the live engine, which would flip the aircraft over on its back. The old rotaries were lubed with castor oil. There are tales, of dubious provenance, that this tended to cause a troublesome laxative effect in the pilot.

JASONMITCHELL · 13 June 2011

W. H. Heydt said:
JASONMITCHELL said:
mrg said: OK, after following up the link, I will just HAVE to read Scalzi's OLD MAN'S WAR. I will buy it from Amazon and he will get the royalty. Even if I don't like it, I owe him that much.
"Fuzzy Nation" is a good read also - central to the plot is the definition of "sapience"
Or, for that issue, H. Beam Piper's _Little Fuzzy_, which explores the legal ramifications of sapience as well, and how to define it. --W. H. Heydt Old Used Programmer
Scalzi's "Fuzzy Nation" is a reboot/homage to Piper's earlier work

mrg · 13 June 2011

Frank J said: Where can we find it?
See top of thread.

John Kwok · 13 June 2011

while this is a bit off topic, I must recommend this most insightful piece from New York City-based skeptic Susan Jacoby on the state of the teaching of evolution in American public schools, in which she commends Zack Kopplin's ongoing effort to repeal LSEA:

http://churchandstate.org.uk/2011/06/american-teachers-display-cowardice-on-evolution/

harold · 13 June 2011

TomS said: You guys are talking about deep subjects, when most people don't understand the real basics of evolution, like "populations evolve, not individuals". A lot of the rhetoric against evolution fails to make that distinction. And don't you realize how many people think that "how come there are still monkeys" presents a real puzzle for evolution? Seriously!
If people want to deny the basic concepts, they need to understand the basic concepts. The only honest attitude toward a subject you are fairly ignorant of is to concede ignorance, respect that experts probably know what they are talking about, and understand that to contradict the experts in a meaningful way you have to first learn what is already worked out. There are a bunch of comments on this thread about aircraft engineering for some reason, a subject that I don't know much about. For now, my default position is that strong consensus principles among aircraft engineers are probably valid. Aircraft engineering will undoubtedly progress, but it won't progress because of me if I don't learn something about it. If I decide that I'm going to show that "all aircraft engineers are wrong about the fundamentals of aircraft engineering", I've got quite a task ahead of me. The very first step is to completely master what is currently known about mainstream aircraft engineering, so that I can comment meaningfully. And if, in doing so, I discover that my prior objections to it were wrong, I should be honest and admit that.

Jud · 13 June 2011

Frank J said:

Yes, the basic principles of evolution are not that hard to grasp at all, if one has some idea of the basic principles of molecular genetics. However, even with that, and especially lacking that, the human tendency to see things in terms of conscious planning or reaction to the environment by individual organisms gets in our way.

— harold
But before one understands the basic principles of molecular genetics, one needs to grasp the basic concept of molecules, and from what I can tell, only 10% of the people have that. As for "conscious planning," even when teaching chemistry I found it hard to avoid saying things like "the molecule 'wants' to do X."
I find the best antidote to the "teleology tendency" is the old Thermos joke. You might be surprised how a little wit can sit in a person's mind for decades. For anyone who hasn't heard or read it: Three friends are debating what the greatest invention of all time is. One says, "Fire." The second says, "The wheel." The third says, "The Thermos." The other two are dumbfounded. "The Thermos? Why?" The third friend says, "You put something hot in it, it stays hot. You put something cold in it, it stays cold." The other two say, in unison, "So what?" The third replies: "How does it know?"

mrg · 13 June 2011

I like that, you get points.

The real funny thing is that it's so close to a creationist argument. I have learned to keep my distance from teleological arguments -- so far I haven't seen there's any honest reason to make them.

Paul Burnett · 13 June 2011

harold said: ....parthogenesis, that also isn't possible in humans.
Waitaminute - did you just say that virgin birth isn't possible (in humans)? See why the fundagelicals don't like you evilutionists?

Henry J · 13 June 2011

Why, aren't most people virgins when they're born?

Frank J · 13 June 2011

And don’t you realize how many people think that “how come there are still monkeys” presents a real puzzle for evolution? Seriously!

— TomS
While most others obsess over the ~25% who are so beyond hope that nothing would ever make them admit evolution, you, I and too few others are concerned with everyone else. How many people who tentatively accept evolution (in caricatured form) are one cool sound bite away from denying it? One reason the the "monkey" meme is so successful is because most people think "ladder," not "tree." I can remember my own "D'Oh!" moment on that one.

Mary H · 13 June 2011

For years I have used a simple example to answer the "why are there still monkeys" question. (I call those preacher questions cause you can almost hear the sound of the voice from a pulpit.) I use my hand and point out the palm represents the common ancestor. The thumb is humans and the fingers are the rest of the modern great apes. Just because we grew fingers doesn't mean we can't grow a thumb. I occasionally get the "great wakening" look. It generally works with teens who ask that question.

Henry J · 13 June 2011

You could also ask if they really think the scientists as a group would cling to something that wasn't at least a close approximation to reality.

Take phlogiston for example, or steady-state universe, or aether theory of light, or various early models of the atom.

Then there's Newton's laws of motion, which aren't technically accurate, but are close enough to remain useful in most day to day applications.

RBH · 13 June 2011

Frank J said:

That’s one of the nice things about the evo tutorial I wrote.

— mrg
Where can we find it?
Here.

harold · 13 June 2011

RBH said:
Frank J said:

That’s one of the nice things about the evo tutorial I wrote.

— mrg
Where can we find it?
Here.
So is it a relativity tutorial or an evolution tutorial?

mrg · 13 June 2011

harold said: So is it a relativity tutorial or an evolution tutorial?
Let's get the links straightened out here: http://www.vectorsite.net/taevo.html If you want a relativity tutorial, try this instead: http://www.vectorsite.net/tprel.html

RBH · 13 June 2011

harold said: So is it a relativity tutorial or an evolution tutorial?
I screwed up the URL. MRG's evolution tutorial is here.

harold · 13 June 2011

While most others obsess over the ~25% who are so beyond hope that nothing would ever make them admit evolution
These are the people who create all the false arguments and generate all the confusion. It is frequently the case that by answering them, one helps a third party to understand better. In 1998, I didn't know anything about political creationism. I probably would have said that it was a waste of time to respond to creationists. I think the scientific and science-supporting community has learned otherwise.

Dave Lovell · 13 June 2011

Henry J said: You could also ask if they really think the scientists as a group would cling to something that wasn't at least a close approximation to reality.
But if your entire world depends on clinging to something that isn't even a close approximation to reality, you might have no problem projecting this behaviour onto "scientists"

John_S · 13 June 2011

harold said: The only honest attitude toward a subject you are fairly ignorant of is to concede ignorance, respect that experts probably know what they are talking about, and understand that to contradict the experts in a meaningful way you have to first learn what is already worked out.
Plato said pretty much the same thing 2,500 years ago. He said that to judge whether a physician is competent, one must quiz the physician on matters of health and disease. But how can he do so unless do so unless he, himself, has expertise on these matters?

Dave Wisker · 13 June 2011

mrg said:
harold said: So is it a relativity tutorial or an evolution tutorial?
Let's get the links straightened out here: http://www.vectorsite.net/taevo.html If you want a relativity tutorial, try this instead: http://www.vectorsite.net/tprel.html
The evolution tutorial is pretty impressive.

Michael · 14 June 2011

Yeah, one of the main things that annoys me about biology is its stubborn refusal to allow clear dividing lines at any level. When a new species forms; when life first formed; when an embryo becomes a human; when an individual can be said to be self-aware. My OCD's demand for putting everything in nice, neat boxes makes the subject frustrating at times.

Frank J · 14 June 2011

These are the people who create all the false arguments and generate all the confusion.

— harold
Actually the ones who create the false arguments and generate all the confusion - the anti-evolution activists - are only a tiny fraction of that ~25% (of the general public that will not admit evolution under any circumstances). In fact I consider them a separate group altogether, though there is no hard line between any demographic. Furthermore, many of the committed anti-evolution activists can be reasonably suspected of not even personally believing what they lead their audience to believe. So to be clear, the activists do need to be countered at every opportunity. But it's most critical to expose that to the ~50% who could be fooled. Not the ~25% who are already irreversibly fooled, or the ~25% who can't be fooled.

Frank J · 14 June 2011

Thanks to mrg and RBH for the link.

I guess the emailer is too busy there learning about his misconceptions to stop by and thank you for the help.

harold · 14 June 2011

Dave Wisker said:
mrg said:
harold said: So is it a relativity tutorial or an evolution tutorial?
Let's get the links straightened out here: http://www.vectorsite.net/taevo.html If you want a relativity tutorial, try this instead: http://www.vectorsite.net/tprel.html
The evolution tutorial is pretty impressive.
They're both very nice. The relativity one is impressive as well. Thanks to MrG for sharing.

mrg · 14 June 2011

harold said: The relativity one is impressive as well.
That's appreciated. Feedback on the evolution document is welcome, the next revision clearly demands some fixes -- I need to elaborate on archaeans for example. The relativity document is stable. If I was told that I could only save one thing I wrote, that would be it, because it a contribution. It doesn't say anything a physicist wouldn't be perfectly familiar with, but for someone coming up cold on the subject, "it actually makes sense" -- which a few readers have told me in exactly those words.

Dave Wisker · 14 June 2011

Frank J said: Thanks to mrg and RBH for the link. I guess the emailer is too busy there learning about his misconceptions to stop by and thank you for the help.
Nor has "layman" cronk let us know if the effort on his behalf was helpful or not.

RBH · 14 June 2011

For those interested, the correspondent contacted me by email, and we're commencing what may turn out to be a lengthy private correspondence about evolution. He has chosen not to participate in this thread, which is his right, though he has read it.

Thanks to everyone for their participation here. I'll leave comments open until sometime this evening.

RBH · 14 June 2011

I should add that he did thank me.

JASONMITCHELL · 14 June 2011

also fu
Mary H said: For years I have used a simple example to answer the "why are there still monkeys" question. (I call those preacher questions cause you can almost hear the sound of the voice from a pulpit.) I use my hand and point out the palm represents the common ancestor. The thumb is humans and the fingers are the rest of the modern great apes. Just because we grew fingers doesn't mean we can't grow a thumb. I occasionally get the "great wakening" look. It generally works with teens who ask that question.
also works... my ancestors came from Europe, how come there aere still Europeans?

Frank J · 14 June 2011

RBH said: I should add that he did thank me.
That's better than nothing, and he's certainly under no obligation to do it here. But did he admit that he was mistaken about anything? And since he claims not to have any agenda, did he make it clear that he had at least as many questions about ID/creationism as he had about evolution?

Just Bob · 14 June 2011

My version: (names changed to protect the innocent)

One of my ancestors was named Smith. One of the Smith daughters married a Jones and had children who were Joneses. A Jones daughter married Mr. Williams and produced me, a Williams. Now my daughter has married a Wu, so my grandchild is a Wu. So that Wu is a descendant of the Smiths. But there are still Smiths around! Smiths didn't go extinct, just because some of their distant relatives have now "evolved" into Wus.

MememicBottleneck · 14 June 2011

Frank J said:

These are the people who create all the false arguments and generate all the confusion.

— harold
Actually the ones who create the false arguments and generate all the confusion - the anti-evolution activists - are only a tiny fraction of that ~25% (of the general public that will not admit evolution under any circumstances). In fact I consider them a separate group altogether, though there is no hard line between any demographic. Furthermore, many of the committed anti-evolution activists can be reasonably suspected of not even personally believing what they lead their audience to believe. So to be clear, the activists do need to be countered at every opportunity. But it's most critical to expose that to the ~50% who could be fooled. Not the ~25% who are already irreversibly fooled, or the ~25% who can't be fooled.
I'm an engineer, and work with many highly educated people. I forgot what nerdy thing we were discussing at lunch one day, but it involved humanity no longer needing thumbs. Two guys (both atheists, both have MSEE degrees) started postulating about how human thumbs would evolve away (I told you it was nerdy). I asked them what would be the selection criteria that would favor smaller thumbs? Will women only mate with men that have small or no thumbs? I got a blank stare. I explained that unless there was some reproductive advantage to small thumbs, the population of all thumb sizes will continue to exist. It was like a lightbulb turned on in their heads. Both of them even remarked that they knew evolution was true, but didn't understand why a species would change. Explaining selection made it crystal clear. There are very few people in my circle of friends that understand evolution beyond random mutation. I think it is a big hole in our science education, and it doesn't surprise me that many, especially religious types, find what they call "macro evolution" incredulous. If you take selection out of the equation, it is incredulous.

RBH · 14 June 2011

Frank J said:
RBH said: I should add that he did thank me.
That's better than nothing, and he's certainly under no obligation to do it here. But did he admit that he was mistaken about anything? And since he claims not to have any agenda, did he make it clear that he had at least as many questions about ID/creationism as he had about evolution?
Out of deference to his desire, I'll not characterize our continuing conversation further. Sorry.

mrg · 14 June 2011

There's a certain lingering curiosity. You might shut down the thread to terminate it.

John Kwok · 14 June 2011

Dave Wisker said:
mrg said:
harold said: So is it a relativity tutorial or an evolution tutorial?
Let's get the links straightened out here: http://www.vectorsite.net/taevo.html If you want a relativity tutorial, try this instead: http://www.vectorsite.net/tprel.html
The evolution tutorial is pretty impressive.
Agreed, but I think mrg missed out on some of the important implcations of Punctuated Equilibrium: 1) Concept was originally derived by Niles Eldredge when he opted to study speciation in the Middle Devonian trilobite Phacops rana and related species as his Ph. D. dissertation. 2) He recognized what he saw as examples of allopatric speciation in the fossil record, but he was also impressed with long-term morphological stasis. 3) Gould coined this pattern "punctuated equilibrium", and both he and Eldredge were invited to contribute a paper for the Thomas J. M. Schopf-edited volume on models in paleobiology; in their original 1972 paper they opted to compare punctuated equilibrium with phyletic gradualism. 4) Of the two, it was Gould who was most radical in thinking through the implications of punctuated equilibrium, hence the primary reason why punctuated equilibrium has been viewed as "radical". 5) Many people do recognize the persistence of morphological stasis in fossil lineages - both paleobiologists and other evolutionary biologists - and there are some, such as Eldredge, David Jablonski (an undergraduate student of Eldredge's who is now a prominent University of Chicago invertebrate paleobiologist) and Massimo Piglucci (now primarily a philosopher, but also a plant evolutionary developmental biologist and geneticist) who contend that there should be a new, "expanded" Modern Synthesis that would take into account morphological stasis and evolutionary developmental biology.

harold · 15 June 2011

From a "bottom up" molecular genetic perspective on evolution, punctuated equilibrium seems likely to reflect stasis due to the natural selection end of things. Adaptation to a transiently relatively stable environment, for example. It's not impossible but less likely that lower mutation rates or something similar played a role. As far as I understand, opening of new niches is associated with radiations, so the selection conjecture seems best.

For better or for worse, punctuated equilibrium is mainly a valid but subjective recognition of morphologic trends in the fossil record.

We also don't know much about soft-bodied like in the Cambrian, for example, and we can only make inferences about the physiology of that hard-bodied animals.

As I have mentioned before, I am a huge fan of Gould's writings.

John Kwok · 15 June 2011

harold said: From a "bottom up" molecular genetic perspective on evolution, punctuated equilibrium seems likely to reflect stasis due to the natural selection end of things. Adaptation to a transiently relatively stable environment, for example. It's not impossible but less likely that lower mutation rates or something similar played a role. As far as I understand, opening of new niches is associated with radiations, so the selection conjecture seems best. For better or for worse, punctuated equilibrium is mainly a valid but subjective recognition of morphologic trends in the fossil record. We also don't know much about soft-bodied like in the Cambrian, for example, and we can only make inferences about the physiology of that hard-bodied animals. As I have mentioned before, I am a huge fan of Gould's writings.
I saw that harold, but am not impressed.... and, moreover, mrg strongly implied that this was primarily Gould's concept - not Eldredge's - and that he isn't aware that there are some notable evolutionary biologists (I cited just two) who think that the prevalence of morphological stasis in the fossil record, as well as new data coming from evolutionary developmental biology, would lead to the development of an "Expanded Modern Synthesis" (to use Massimo Pigliucci's term). Aside from just this partial misrepresentation of Punctuated Equilibrium, I might add too that mrg's Evolution primer should contain as well information on ecology (e. g. studying species diversity and conservation biology by noting the work of Robert MacArthur and E. O. Wilson in developing their Theory of Island Biogeography) and on coevolution, most notably the Red Queen, as conceived by Leigh Van Valen (who coined the term, though credit should also be given too to Michael Rosenzweig who conceived of it independently of Van Valen, but dubbed it the "rat race").

mrg · 15 June 2011

Your comments are noted, Mr. Kwok. No further discussion on the matter either needed or desired.

harold · 15 June 2011

John Kwok -

I have no disputes with your points whatsoever, and didn't mean to imply any (although I think the MrG's evolution summary is excellent, as indicated by the high level of your critiques). I was just adding a thought.

Although I am a fan of Gould, I have no formal training in paleontology whatsoever (some amateur reading, of course).

I think that Darwin amazingly came at the theory of evolution in the hardest possible way - lacking any knowledge of genetic mechanisms, and having to hypothesize what was going on from a "top down" perspective. Historical reviews will always emphasize this approach.

Since the beginning of the molecular biology era, the fact and basic mechanisms of evolution have become even more obvious and easy to understand.

John Kwok · 15 June 2011

John Kwok said:
harold said: From a "bottom up" molecular genetic perspective on evolution, punctuated equilibrium seems likely to reflect stasis due to the natural selection end of things. Adaptation to a transiently relatively stable environment, for example. It's not impossible but less likely that lower mutation rates or something similar played a role. As far as I understand, opening of new niches is associated with radiations, so the selection conjecture seems best. For better or for worse, punctuated equilibrium is mainly a valid but subjective recognition of morphologic trends in the fossil record. We also don't know much about soft-bodied like in the Cambrian, for example, and we can only make inferences about the physiology of that hard-bodied animals. As I have mentioned before, I am a huge fan of Gould's writings.
I saw that harold, but am not impressed.... and, moreover, mrg strongly implied that this was primarily Gould's concept - not Eldredge's - and that he isn't aware that there are some notable evolutionary biologists (I cited just two) who think that the prevalence of morphological stasis in the fossil record, as well as new data coming from evolutionary developmental biology, would lead to the development of an "Expanded Modern Synthesis" (to use Massimo Pigliucci's term). Aside from just this partial misrepresentation of Punctuated Equilibrium, I might add too that mrg's Evolution primer should contain as well information on ecology (e. g. studying species diversity and conservation biology by noting the work of Robert MacArthur and E. O. Wilson in developing their Theory of Island Biogeography) and on coevolution, most notably the Red Queen, as conceived by Leigh Van Valen (who coined the term, though credit should also be given too to Michael Rosenzweig who conceived of it independently of Van Valen, but dubbed it the "rat race").
Just a quick correction: Massimo Pigliucci's term for a new evolutionary theory is the "Extended Synthesis", which also happens to be part of a title of his edited volume published by MIT Press of the "Altenberg 16" conference which included as participants, invertebrate paleobiologist David Jablonski and evolutionary geneticist Richard Lewontin. I, too, harold, am especially fond of Steve Gould's writings, but it needs to be noted that the concept of punctuated equilibrium was initially Eldredge's not his. That isn't apparent from mrg's primer, and anyone who reads it may mistakenly conclude that much of the theoretical framework behind it was solely Gould's.

John Kwok · 15 June 2011

harold said: John Kwok - I have no disputes with your points whatsoever, and didn't mean to imply any (although I think the MrG's evolution summary is excellent, as indicated by the high level of your critiques). I was just adding a thought. Although I am a fan of Gould, I have no formal training in paleontology whatsoever (some amateur reading, of course). I think that Darwin amazingly came at the theory of evolution in the hardest possible way - lacking any knowledge of genetic mechanisms, and having to hypothesize what was going on from a "top down" perspective. Historical reviews will always emphasize this approach. Since the beginning of the molecular biology era, the fact and basic mechanisms of evolution have become even more obvious and easy to understand.
I concur with most of your comments, harold, especially the paragraph that begins with "I think that Darwin amazingly came at the theory of evolution in the hardest possible way - lacking any knowledge of genetic mechanisms..." (though remember too that, independent of Darwin, Wallace had stumbled upon Natural Selection, which is why that theory should be referred to correctly as the Darwin - Wallace Theory of Evolution via Natural Selection). As for your concluding comment, that observation depends on whom you talk to, especially in the field of evolutionary biology. P. S. As a personal aside, I might add that I treasure as much - maybe more - my autographed copies of Steve Gould's books as those of Frank McCourt.

John Kwok · 15 June 2011

@ harold - my last comment should read as follows:

As for your concluding comment, that observation depends on whom you talk to, especially in the field of evolutionary developmental biology.

John Kwok · 15 June 2011

mrg said: Your comments are noted, Mr. Kwok. No further discussion on the matter either needed or desired.
Duly noted, but I hope you bear in mind what I have just written in reply to harold. I would be remiss too in noting that there should be some discussion of group and kin selection, especially when you've discussed E. O. Wilson's concept of sociobiology (which was influenced by prior work in that, and work, that, I might add, led to Dawkins's publication of "The Selfish Gene").

Frank J · 15 June 2011

Out of deference to his desire, I’ll not characterize our continuing conversation further. Sorry.

— RBH
No problem. I respect your decision and his.

Henry J · 15 June 2011

Didn't Darwin say that evolutionary changes are apt to be sporadic, and on the outskirts of a population's range? Granted he didn't give a name to that phenomena, but isn't that the basic concept in P.E.?

mrg · 15 June 2011

John Kwok said: Duly noted, but I hope you bear in mind ...
"I heard you twice the first time."

John Kwok · 15 June 2011

Henry J said: Didn't Darwin say that evolutionary changes are apt to be sporadic, and on the outskirts of a population's range? Granted he didn't give a name to that phenomena, but isn't that the basic concept in P.E.?
No, Darwin didn't. It was Huxley - who, unlike Darwin, was more familiar with the fossil record - who finally impressed upon him the editorial changes that Darwin did note in the 4th edition of "On the Origin of Species". Nor did Darwin truly appreciate the fact of long-term morphological stasis within the fossil record.

John Kwok · 15 June 2011

John Kwok said:
Henry J said: Didn't Darwin say that evolutionary changes are apt to be sporadic, and on the outskirts of a population's range? Granted he didn't give a name to that phenomena, but isn't that the basic concept in P.E.?
No, Darwin didn't. It was Huxley - who, unlike Darwin, was more familiar with the fossil record - who finally impressed upon him the editorial changes that Darwin did note in the 4th edition of "On the Origin of Species". Nor did Darwin truly appreciate the fact of long-term morphological stasis within the fossil record.
@ Henry J - It would be misleading to think that Darwin did think originally of Punctuated Equilibrium, hence why I opened with, "No, Darwin didn't". However, in the absence of genetics and population genetics, and of course, molecular biology too, it is still an impressive achievement of his (and Wallace's) that much of what he had conceived, as stated in the first edition of "On the Origin of Species", has been borne out by biology in the century and a half since the initial publication of that book.

mrg · 15 June 2011

"The more times you run over a dead cat, the flatter it gets."

John Kwok · 15 June 2011

mrg said:
John Kwok said: Duly noted, but I hope you bear in mind ...
"I heard you twice the first time."
Obviously you didn't since you've posted again. May I suggest as an excellent teaching resource in improving your evolution primer, that you refer to Carl Zimmer's "The Tangled Bank: An Introduction to Evolution", a "textbook" on evolution for the average educated layperson, or his "Evolution", his companion volume to the PBS NOVA miniseries. I would also recommend reading Douglas Futuyma's textbook for an advanced introductory college course on evolution, "Evolutionary Biology", which is now in its third edition.

mrg · 15 June 2011

John Kwok said: Obviously you didn't since you've posted again.
Well, obviously it's not smart to post in response to anything you say, but this is too good pass up: "You said you heard me, so that means you didn't." OK, then, should I tell you I didn't, so you think I did? That's a rhetorical question of course, obviously you don't care whether I heard you or not. And that certainly matches my level of concern. Bored now. "The show must go on, but I don't have to stay and watch."

John Kwok · 15 June 2011

mrg said:
John Kwok said: Obviously you didn't since you've posted again.
Well, obviously it's not smart to post in response to anything you say, but this is too good pass up: "You said you heard me, so that means you didn't." OK, then, should I tell you I didn't, so you think I did? That's a rhetorical question of course, obviously you don't care whether I heard you or not. And that certainly matches my level of concern. Bored now. "The show must go on, but I don't have to stay and watch."
IMHO your latest retort ignores suggested reading that I have posted here, not only for your benefit, but more importantly, for the retired history teacher whose "innocent" e-mail query prompted RBH to comment. May I suggest that you just note what I have written without adding any risible rejoinders, please? Again, I concur with harold and Dave Wisker that you have written a good evolution primer; however, as harold himself has noted, I am merely offering you sound suggestions on improving it. Just take that advice for what it is please.

Ahcuah · 15 June 2011

harold said:
TomS said: You guys are talking about deep subjects, when most people don't understand the real basics of evolution, like "populations evolve, not individuals". A lot of the rhetoric against evolution fails to make that distinction. And don't you realize how many people think that "how come there are still monkeys" presents a real puzzle for evolution? Seriously!
If people want to deny the basic concepts, they need to understand the basic concepts. The only honest attitude toward a subject you are fairly ignorant of is to concede ignorance, respect that experts probably know what they are talking about, and understand that to contradict the experts in a meaningful way you have to first learn what is already worked out.
I am reminded of a discussion I had once with a global warming denier. I asked him to answer a simple, quintessentially scientific question: "What evidence would it take for you to change your mind?" His answer? "I don't know enough to come up with anything." Then how could he possibly know enough to deny global warming science??? [I use "global warming" here instead of "climate change" because his claim was that the earth had warmed in the past without human causation, and therefore humans were not doing it now either.]

mrg · 15 June 2011

That's sort of a sideways example of the sort of mentality one sees in some science crackpots, Einstein bashers in particular: "Because I'm an amateur and can see the forest for the trees, I've been able to see an obvious flaw that a century of physicists have failed to notice."

Science Avenger · 15 June 2011

Ahcuah said: I use "global warming" here instead of "climate change" because his claim was that the earth had warmed in the past without human causation, and therefore humans were not doing it now either.
That's right up there with the "Mars is warming without humans, therefore the earth is too", to which I reply: That's like saying the 10 donuts I eat every morning can't be making me fat, because Joe is fat and doesn't eat donuts.

Dave Wisker · 15 June 2011

Another annoying habit with many IDers is to assert something, then, when cited evidence from the literature to the contrary, complain that they don't understand the literature. Or worse, accuse one of "literature bombing".

Dale Husband · 15 June 2011

Ahcuah said: I am reminded of a discussion I had once with a global warming denier. I asked him to answer a simple, quintessentially scientific question: "What evidence would it take for you to change your mind?" His answer? "I don't know enough to come up with anything." Then how could he possibly know enough to deny global warming science??? [I use "global warming" here instead of "climate change" because his claim was that the earth had warmed in the past without human causation, and therefore humans were not doing it now either.]
Right, because global warming denialism is not really about the science, it's about the fact that the implications of the science threaten an ideology that the denialists adhere to and want to sell to others. It's like religion to those bastards! And they will even rewrite history to make their ideology, which was discredited by actual history, look credible once more. And in my judgement as a Honorable Skeptic, I consider such a thing to be a crime against humanity. Stick with the facts, ALL OF THEM, and always be consistent. Otherwise, you are being fraudulant.

flyonthewall · 15 June 2011

These wankers don't want answers. They never have.
In the time it took to write that email they could have figured out the answer.

There's nothing that you can do or say to change their minds. They will ignore the answer and move on to the next person.

What they are looking for is a non-answer. The non-answer validates their beliefs. The more people that ignore them or fail to respond, the more their beliefs are validated.

So the best response to this is just what you did.

Dave Wisker · 15 June 2011

mrg said: That's sort of a sideways example of the sort of mentality one sees in some science crackpots, Einstein bashers in particular: "Because I'm an amateur and can see the forest for the trees, I've been able to see an obvious flaw that a century of physicists have failed to notice."
Of course, Einstein didn't help things by saying "The only thing that interferes with my learning is my education.” To many cranks take that quote far too literally.

mrg · 15 June 2011

If you can stomach it, check the Conservapedia article on relativity. It is so mad that is suspected to be a collaboration of honestly crazy people, along with a gang of Loki trolls who were determined to see just how big of a froth they could drive the crazy people into.

harold · 15 June 2011

mrg said: If you can stomach it, check the Conservapedia article on relativity. It is so mad that is suspected to be a collaboration of honestly crazy people, along with a gang of Loki trolls who were determined to see just how big of a froth they could drive the crazy people into.
You just accurately described every article in Conservapedia.

mrg · 15 June 2011

Actually, the quantum physics article is more or less straightfoward. The relativity article is unusually crazy.

Mike Elzinga · 15 June 2011

mrg said: Actually, the quantum physics article is more or less straightfoward. The relativity article is unusually crazy.
The ID/creationists have been a bit timid about using quantum mechanics and relativity arguments in defending their distortions of physics as they relate to the age of the universe and the methods of dating. Jason Lisle is about the only one who has gone off the rails using his bastardization of relativity to “solve” the distant starlight problem. I don’t recall any trolls or rubes attempting to defend Lisle or copy/paste “various interpretations” of relativity. But I can predict that if any of them ever tries in front of any physicist, they’ll get mauled so badly that they will look like the Black Knight sent through a wood chipper. Relativity is fundamental and well-understood by most physicists. And there aren’t as many of those distorted metaphors floating around because of bad popularizations as there are for thermodynamics. And I think the followers of Maharishi Mahesh Yogi, and Depak Chopra, and also that “What the bleep do we know?” video are the primary woo-woo interpretations of quantum mechanics currently in circulation. I suspect that these “quantum gods religions” pretty much scare off the ID/creationist fundamentalists who don’t want to try to claim “religious” territory already claimed by others.

Mike Elzinga · 15 June 2011

Sheesh! I just looked at that Conservapedia article on relativity.

That’s really sick!

I don’t go over there very often.

Mike Elzinga · 15 June 2011

I love this one in “counterexample” 35.

The barn and ladder paradox: Person A has a ladder too long to store in his barn. Person B takes the ladder and runs very fast into the barn. For A the ladder will contract, and if the velocity is fast enough, it will fit in the barn. But to B, who is moving with the ladder, it is the barn that will contract, making the problem even worse. So, who is correct? Does the ladder fit in the barn? This problem was considered in the book Introduction to Electrodynamics by David Griffiths, and the author, who supports Relativity, claim that both are correct. The ladder both fits and doesn’t fit in the barn. This is obviously against elementary rules of logic.

This easy exercise is in nearly every introductory relativity topic in beginning physics courses. Whoever put that one in there as a “counterexample” almost certainly flunked the relativity section of physics; and probably the entire physics course as well. He just doesn’t get it. The rest those “counterexamples” are just as bad. I should stop here. I don’t recall seeing anything this bad; not even with thermo. I wonder where it’s going.

mrg · 15 June 2011

It's so sick that the notion there's some Loki trolling pumping it up seems MIGHTY plausible. But if there's a sucker job going on, there seems to be plenty of suckers going along with it.

Eric Finn · 15 June 2011

Mike Elzinga said: I love this one in “counterexample” 35. [...] This easy exercise is in nearly every introductory relativity topic in beginning physics courses. Whoever put that one in there as a “counterexample” almost certainly flunked the relativity section of physics; and probably the entire physics course as well. He just doesn’t get it. The rest those “counterexamples” are just as bad. I should stop here. I don’t recall seeing anything this bad; not even with thermo. I wonder where it’s going.
Dear Mike Elzinga, The barn example is not that easy to solve by using the known equations for Lorenz contraction only. Even our friends studying biology might be at loss here. I think there was one element missing. The doors of the barn should be closed simultaneously to contain that too-long ladder. This is a good example of an attempt to mislead the audience. The theory of biological evolution offers even more opportunities, because we do not have a strictly mathematical model for it. P.S. I still remember your lecture on entropy.

Henry J · 15 June 2011

I think there was one element missing. The doors of the barn should be closed simultaneously to contain that too-long ladder.

Simultaneously in which reference frame? ;) Henry J

Mike Elzinga · 16 June 2011

Eric Finn said: Dear Mike Elzinga, The barn example is not that easy to solve by using the known equations for Lorenz contraction only. Even our friends studying biology might be at loss here. I think there was one element missing. The doors of the barn should be closed simultaneously to contain that too-long ladder. This is a good example of an attempt to mislead the audience. The theory of biological evolution offers even more opportunities, because we do not have a strictly mathematical model for it.
Simultaneously in which reference frame? ;) Henry J
Indeed, Henry J is pointing to the answer. In the frame of reference of the barn, an observer “sees” the Lorentz contracted pole fitting into the length of the barn with both the forward and aft doors momentarily closed. However, in the frame of reference of the pole, the moving barn is contracted; but the doors are not simultaneously closed and open. In the frame of the pole, the Lorentz contracted barn passes over the pole, with the forward door opening just as the forward door reaches the front of the pole, then the back door opens just as the back of the barn reaches the front of the pole, and then the forward door closes just as the front of the barn reaches the back of the pole. Events (the closing of the doors) that are simultaneous in the frame of reference of the barn are NOT simultaneous in the frame of the pole. And that is the point; simultaneity depends on the inertial reference frame.

P.S. I still remember your lecture on entropy.

(P.S. If you are interested, there is a more complete discussion - with an example - that just took place over on the Bathroom Wall beginning on page 136 and going through page 140. It has ended by now.)

stevaroni · 16 June 2011

Mike Elzinga said: Sheesh! I just looked at that Conservapedia article on relativity.
Hmmmm....

(from Conservapedia) Relativity has been met with much resistance in the scientific world. To date, a Nobel Prize has never been awarded for Relativity. Louis Essen, the man credited with determining the speed of light, wrote many fiery papers against it such as The Special Theory of Relativity: A Critical Analysis. Relativity is in conflict with quantum mechanics

Wow... Yet another theory in trouble. Who knew? I suppose all that pesky nuclear proliferation isn't that scary after all, now that Conservapedia says things like atomic bombs don't work.

Rolf Aalberg · 16 June 2011

Out of curiosity I did some googling and stumbled over ten questions
Had not seen it before. Subject is creationism; not history teachers.

mrg · 16 June 2011

Henry J said: Simultaneously in which reference frame? ;)
Yep. "Relativistic simultaneity, or more precisely the lack thereof."

Eric Finn · 16 June 2011

Mike Elzinga said: (P.S. If you are interested, there is a more complete discussion - with an example - that just took place over on the Bathroom Wall beginning on page 136 and going through page 140. It has ended by now.)
I read those messageges through and it appers that your message is plain and simple

Entropy is strictly about counting accessible energy microstates consistent with the macroscopic state of a thermodynamic system. It has to do with how the internal energy of a system is distributed among those microstates. It has nothing to do with the spatial ordering of those microstates.

Many of the examples of entropy in textbooks deal with ensembles of non-interacting particles. It may be a way to visualize the concept of entropy, but at the same time, there is the risk that the visualization overwhelms understanding. You recognized the work by Lambert in tackling this problem in introductory textbooks. I found your remark on information and entropy hilarious, although I do understand that misunderstandings in this area are prone to create problems.

Presumably a system in a well-defined state (low entropy) has more “information” (according to ID/creationist “information wags”) than one that can be in many possible states (large entropy) where we cannot be certain about which one (I can’t tell you how they arrive at this conclusion). But an isolated system in which the constituents are also isolated from exchanging energy with each other will remain in a single microstate (zero entropy). However, being isolated means that we don’t know which microstate it is actually in. So how much “information” do we have of a state that has “well-defined information?”

In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail. The second law of thermodynamics would prohibit lizards turning into birds.

mrg · 16 June 2011

Eric Finn said: The second law of thermodynamics would prohibit lizards turning into birds.
Well, if it did, wouldn't it prohibit humans from developing jet airplanes from prop planes? After all, it's not like WE can violate the SLOT either. So if the SLOT rules out evolutionary "constructions" ... why does it permit human constructions?

mrg · 16 June 2011

Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment).
OK, on reading that again I am wondering if you're joking. The only way I can visualize a biological system that has no interactions with its environment is one that is, like, dead. And you're right, dead creatures don't evolve much.

Kevin B · 16 June 2011

Eric Finn said: The second law of thermodynamics would prohibit lizards turning into birds.
On a point of information. Do you mean that some specific lizard can't turn into a bird over the course of an afternoon, or do you mean that lizards can't evolve into birds over the course of many generations? :)

Eric Finn · 16 June 2011

mrg said: OK, on reading that again I am wondering if you're joking. The only way I can visualize a biological system that has no interactions with its environment is one that is, like, dead. And you're right, dead creatures don't evolve much.
Dear mrg, I am dead serious. In fact, I claim to be much more accurate in applying basic physical principles in biological systems than our friends, creationists are. Creationists often refer to textbook examples discussing non-interacting particles, and apply them to real biological systems. Instead, I apply the the non-interacting physics only to non-interacting biological systems. Thus, my approach is valid. And I have shown that the theory of evolution does not work.

mrg · 16 June 2011

Kevin B said: Do you mean that some specific lizard can't turn into a bird over the course of an afternoon, or do you mean that lizards can't evolve into birds over the course of many generations? :)
I think he's joking -- forgetting, maybe deliberately, that we get weirder and more obscure stuff from creationists posted here almost every day.

mrg · 16 June 2011

Eric Finn said: I am dead serious.
Sure you are.

Rolf Aalberg · 16 June 2011

I am unable to comment on that without a plausible example of a system without interactions. A game of chess without moving the pieces?

Eric Finn · 16 June 2011

Rolf Aalberg said: I am unable to comment on that without a plausible example of a system without interactions. A game of chess without moving the pieces?
A system consisting of ideal gas is one example (although there may be interactions with the wall of the container). Even bacteria, not to talk about humans, can "evolve" from there. Thus, I have proved that the theory of evolution does not work. My proof is solid and the starting principles have been taken directly from internationally published creationist literature.

Eric Finn · 16 June 2011

Even bacteria, not to talk about humans, can "evolve" from there.

Not even bacteria, not to talk about humans, can "evolve" from there.

phantomreader42 · 16 June 2011

Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail. The second law of thermodynamics would prohibit lizards turning into birds.
Such conditions do not exist in the real world. The proverbial "perfectly spherical cow in a vacuum" could not evolve, but actual living creatures do. This has been observed, multiple times, in a variety of situations. You don't get to declare centuries of science magically invalid because it disagrees with your calculations about a situation that doesn't exist in the real world.

eric · 16 June 2011

Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail.
Absolutely it will fail. Can't have any descent with modification without sex. Or at least gathering enough food from the environment for cloning. :)

Stanton · 16 June 2011

Eric Finn said:
mrg said: OK, on reading that again I am wondering if you're joking. The only way I can visualize a biological system that has no interactions with its environment is one that is, like, dead. And you're right, dead creatures don't evolve much.
Dear mrg, I am dead serious. In fact, I claim to be much more accurate in applying basic physical principles in biological systems than our friends, creationists are. Creationists often refer to textbook examples discussing non-interacting particles, and apply them to real biological systems. Instead, I apply the the non-interacting physics only to non-interacting biological systems. Thus, my approach is valid. And I have shown that the theory of evolution does not work.
Your approach is invalid partly because a) you can not apply thermodynamics to biological systems, b) evolution has been and continues to be observed, and c) there is no such thing as a "non-interacting biological system," aside from, say, an ecosystem that has all life removed from it, i.e., the immediate aftermath of an anoxic or volcanic event.

Mike Elzinga · 16 June 2011

mrg said:
Kevin B said: Do you mean that some specific lizard can't turn into a bird over the course of an afternoon, or do you mean that lizards can't evolve into birds over the course of many generations? :)
I think he's joking -- forgetting, maybe deliberately, that we get weirder and more obscure stuff from creationists posted here almost every day.
I suppose a good cognitive metaphor for a system whose constituents didn’t interact with each other and with the external world of knowledge would be FL and IBIG.

Eric Finn · 16 June 2011

Stanton said: Your approach is invalid partly because a) you can not apply thermodynamics to biological systems, b) evolution has been and continues to be observed, and c) there is no such thing as a "non-interacting biological system," aside from, say, an ecosystem that has all life removed from it, i.e., the immediate aftermath of an anoxic or volcanic event.
Thank you for your response. The following statement confuses me:

Your approach is invalid partly because a) you can not apply thermodynamics to biological systems

There must be something in biological systems that defy physics. Mike Elzinga, can you help me here

phantomreader42 · 16 June 2011

Congratulations, you've just proven that evolution is impossible in an entirely fictitious universe that exists only in mathematical abstrations and bears no resemblance to actual conditions observed in reality. Get back to us when you're capable of addressing things in THIS universe.
Eric Finn said:
Rolf Aalberg said: I am unable to comment on that without a plausible example of a system without interactions. A game of chess without moving the pieces?
A system consisting of ideal gas is one example (although there may be interactions with the wall of the container). Even bacteria, not to talk about humans, can "evolve" from there. Thus, I have proved that the theory of evolution does not work. My proof is solid and the starting principles have been taken directly from internationally published creationist literature.

Mike Elzinga · 16 June 2011

Eric Finn said: There must be something in biological systems that defy physics. Mike Elzinga, can you help me here
I’m not sure what Stanton meant. I’m pretty sure he didn’t mean that thermodynamics and the second law don’t apply to biological systems. And as for “applying” it (as in the case of someone analyzing biological systems using the laws of thermodynamics), that is a pretty routine area of research; especially in studies of metabolic processes at the organism level as well as at the cellular level.

Eric Finn · 16 June 2011

eric said: Absolutely it will fail. Can't have any descent with modification without sex. Or at least gathering enough food from the environment for cloning. :)
eric, my namesake It is always nice to hear that real scientists agree with me. You are always thinking about sex. Well, under certain circumstances it is important.

Eric Finn · 16 June 2011

phantomreader42 said: Congratulations, you've just proven that evolution is impossible in an entirely fictitious universe that exists only in mathematical abstrations and bears no resemblance to actual conditions observed in reality. Get back to us when you're capable of addressing things in THIS universe.
Thank you, phantomreder42 I am sort of proud about having received this recognition. On the other hand, I must confess that the idea is not solely mine. In fact, the basic idea came from this very forum. I think almost all the lunatic attempts to overthrow the theory of evolution boil down to arguments about non-interacting systems being incapable of supporting evolution.

phantomreader42 · 16 June 2011

So, Eric, did you perform these calculations in a frictionless vacuum on an infinite plane of uniform density?
Eric Finn said:
Rolf Aalberg said: I am unable to comment on that without a plausible example of a system without interactions. A game of chess without moving the pieces?
A system consisting of ideal gas is one example (although there may be interactions with the wall of the container). Even bacteria, not to talk about humans, can "evolve" from there. Thus, I have proved that the theory of evolution does not work. My proof is solid and the starting principles have been taken directly from internationally published creationist literature.

raven · 16 June 2011

I am unable to comment on that without a plausible example of a system without interactions.
Have you visited a cemetery lately? They are full of noninteracting humans going nowhere.

Just Bob · 16 June 2011

raven said: Have you visited a cemetery lately? They are full of noninteracting humans going nowhere.
Umm, no. Aren't they interacting with soil organisms and chemistry, releasing gases, etc.? I think several commenters didn't quite get it on the first go-around. Eric F. made a tongue-in-cheek statement, showing that ONLY under impossible conditions (a system not interacting with its environment) can evolution be shown to be impossible. IOW, in the real universe it is not only NOT impossible, it is inescapable. Like T. H. White's laws for ant society: Whatever is not forbidden is compulsory.

phantomreader42 · 16 June 2011

Just Bob said:
raven said: Have you visited a cemetery lately? They are full of noninteracting humans going nowhere.
Umm, no. Aren't they interacting with soil organisms and chemistry, releasing gases, etc.? I think several commenters didn't quite get it on the first go-around. Eric F. made a tongue-in-cheek statement, showing that ONLY under impossible conditions (a system not interacting with its environment) can evolution be shown to be impossible. IOW, in the real universe it is not only NOT impossible, it is inescapable. Like T. H. White's laws for ant society: Whatever is not forbidden is compulsory.
Except that idiots routinely make exactly the same statements without their tongues anywhere near their cheeks. Creationists routinely deny the existence of the sun! It's on FSTDT, and on the BW here not long ago.

David Fickett-Wilbar · 16 June 2011

Mike Elzinga said: Sheesh! I just looked at that Conservapedia article on relativity. That’s really sick! I don’t go over there very often.
All right, best I can understand things, they're saying: 1. Nobody has ever won a Nobel prize in relativity, which shows it is wrong. 2. Critics of relativity have never won a Nobel prize, which shows they are right and that there's a plot against them. Lovely.

David Fickett-Wilbar · 16 June 2011

Mike Elzinga said: I should stop here. I don’t recall seeing anything this bad; not even with thermo. I wonder where it’s going.
I think they're traitors. By denying the laws of physics they are undermining the credibility of our nuclear deterrent.

mrg · 16 June 2011

phantomreader42 said: Except that idiots routinely make exactly the same statements without their tongues anywhere near their cheeks.
As the saying goes, and amply demonstrated by the creationists who post here: "The difference between genius and stupidity is that genius has limits."

Mike Elzinga · 16 June 2011

David Fickett-Wilbar said:
Mike Elzinga said: I should stop here. I don’t recall seeing anything this bad; not even with thermo. I wonder where it’s going.
I think they're traitors. By denying the laws of physics they are undermining the credibility of our nuclear deterrent.
I suspect mrg’s observation is true that there may be some Loki trolling going on over there. Scroll down to the section on “Political aspects of relativity;” and especially take note of footnote 59.

Tribe, acknowledging help by Obama, argued that the Constitution should be interpreted to establish a right to federally funded abortion and that, more generally, Roe v. Wade does not go far enough. They insisted that a relativistic "curvature of space" could achieve this result by expanding application of the Constitution based on its impact on personal choice. "The Roe v. Wade opinion ignored the way in which laws regulating pregnant women may shape the entire pattern of relationships among men, women, and children. It conceptualized abortion not in terms of the intensely public question of the subordination of women to men through the exploitation of pregnancy, but in terms of the purportedly private question of how women might make intimately personal decisions about their bodies and their lives. That vision described a part of the truth, but only what might be called the Newtonian part. ... [A] change in the surrounding legal setting can constitute state action that most threatens the sphere of personal choice. And it is a 'curved space' perspective on how law operates that leads one to focus less on the visible lines of legal force and more on how those lines are bent and directed by the law's geometry." Laurence H. Tribe, The Curvature of Constitutional Space: What Lawyers Can Learn from Modern Physics, 103 Harv. L. Rev. 1, 16-17

eric · 16 June 2011

Mike Elzinga said: Sheesh! I just looked at that Conservapedia article on relativity. That’s really sick!
Reference 60 tells you all you really need to know. I don't think we have need of any loki troll hypothesis here!

Rolf Aalberg · 16 June 2011

raven said:
I am unable to comment on that without a plausible example of a system without interactions.
Have you visited a cemetery lately? They are full of noninteracting humans going nowhere.
Before reaching the 'going nowhere state' (theirs), I think I smell some interesting interactive activity there.

WoljaIlpapa · 16 June 2011

There are two problems here in dealing with this question.

First most of these questions are from committed ID'ers trying to score points. If he is pushing a barrow then talking to him is a waste of time but may help someone who is genuinally interested. This guy may possibly be sincere, unlikely as anyone sincere would never get caught in the big vs incremental trap, which highlights the next problem.

If he was sincere you run into this issue that dogs science at the moment. It's opponents use simple language and terminology that means the same thing to everyone. They don't need to over explain with references they just deliver short sharp messages that are understandable, for eg large portions of the population treat theories as hypotheses , rather than the reverse in the scientific viewpoint, and it allows opponents to play wedge politics with easily understandable sound bites that resonate with popular understanding.

Some scientists are very good at explaining science in an easily understood fashion that helps counteract this issue, only to be attacked by other scientists because they gloss over some things to deliver the message, but the majority immediately go to detail. IMO opinion science needs to start fighting fire with fire and delivering easily understood responses to dumb arse questions, taken straight from creationist propaganda, as the one here.

TomS · 17 June 2011

WoljaIlpapa said: IMO opinion science needs to start fighting fire with fire and delivering easily understood responses to dumb arse questions, taken straight from creationist propaganda, as the one here.
There are these considerations. One should be careful of giving the impression that the rhetoric of the evolution deniers touches on some deep problem, something that is really a controversy in science. Many people were glad when they walked out of their last science class in high school, and never had to think about it again. And just about everybody hates mathematics.

Marion Delgado · 18 June 2011

I have a simple unbias question no "scientists" have been able to answer:

If evolution is true,

and if climate is true ..

Why are there still snow monkeys?

Woljailpapa · 18 June 2011

WoljaIlpapa said: IMO opinion science needs to start fighting fire with fire and delivering easily understood responses to dumb arse questions, taken straight from creationist propaganda, as the one here.
There are these considerations. One should be careful of giving the impression that the rhetoric of the evolution deniers touches on some deep problem, something that is really a controversy in science. Many people were glad when they walked out of their last science class in high school, and never had to think about it again. And just about everybody hates mathematics.
I certainly have a dislike of mathematics however how do scientists, using words that confuse the majority and are easily countered by the agitators fighting to prevent action on the major issues , sell the messages ie climate change is real?

Mike Elzinga · 18 June 2011

Woljailpapa said: I certainly have a dislike of mathematics however how do scientists, using words that confuse the majority and are easily countered by the agitators fighting to prevent action on the major issues , sell the messages ie climate change is real?
It is a good exercise for scientists to learn to put mathematical concepts into a language that the layperson can understand. After all, it’s the concepts that are important. But the public still needs to learn to think mathematically. It’s important for understanding many things; including statistical studies and keeping budgets. Since their very beginning back in the early 1970s the ID/creationists have been deliberately misinforming the public about scientific concepts. That tactic must be constantly exposed in order to show the real character of the ID/creationist movement. When that is done effectively, people get really angry at ID/creationists; and the tactic no longer works among people who understand what ID/creationists are doing. But this shtick is also being done with history by the likes of David Barton. This tactic of trying to rewrite history as well as science is well-organized and well-funded. There are people with lots of money who seem to think that the general public should be kept ignorant; and they go to the extremes of trying to pass legislation that makes it mandatory to misinform and get legal protection while doing it. That’s the nature of the people we are dealing with. If people in this country are going to continue a trend toward ignorance and dependency on others, then the pseudo-science and pseudo-history of the ID/creationists and other extremist groups will be the canary-in-the-coalmine that is the indicator of not only a failing educational system, but a failing institution of investigative journalism and news reporting as well.

mrg · 18 June 2011

Sadly, there are many techicals who find it difficult to express themselves in a simple fashion, and much more unfortunately there are others who simply don't want to, taking pleasure in talking over the heads of the audience: "What fun is it being an expert if you make yourself easy to understand?"

In more general terms, not all technicals understand one of the fundamentals of technical writing: "A workable, easy-to-grasp simplification is generally much more useful than the long-winded eye-glazing detailed truth."

Richard · 18 June 2011

Woljailpapa/Mike/Mrg's comments clearly indicate the inadequacy of our education system. Definitely K-12 but also probably Undergraduate studies. I also disliked Mathematics in school. In college however I took a liking to it and majored in Math. (Go figure). IMO Evolution is misunderstood because it is not taught in High School. Yes, there may be a Heroic Teacher here and there, or an enlightened School District here and there that does teach it and teaches it properly. But I am afraid that is the exception rather than the rule. In K-12 Mathematics education Statistics takes a back seat to Geometry, Algebra/Trig, Pre-Calculus and Calculus. But I would argue that Statistics has much more relevance today than all the other subjects put together. Plus, IMO Mathematics education seems to have as its main objective to turn people off completely to it. There is something fundamentally wrong with our K-12 Educational System that students just can't seem to wait to graduate just to get over and done with it. Many just drop out. The result of this is a citizenry that has no foundation to be able to analyze the issues and tends to feel disdain towards the "educated elite". Decisions are made on the basis of personalities, sound bites and slogans.

Scott F · 18 June 2011

On the subject of education, I've recently joined a Toastmasters program (just for the fun of it). I wasn't sure what theme, if any, I wanted to focus on, but my wife convinced me that "skeptic" is a good theme, with an opening 5-to-7 minute speech on the "scientific method". I can probably put together my own presentation, but if anyone has some resources (or a concise description) they like on the subject, I'd appreciate any pointers.

FYI, Toastmasters as a program is more concerned about how one presents the speech (the actual mechanics of speaking, gesturing, eye contact, use of notes, etc), and doesn't really care what the content of the speech is, or where the material comes from. (Though they do explicitly discourage the subjects of religion and politics, just to maintain relative harmony in the group.) That said, while we don't have any creationists in the group, we do have some "alternative medicine" woo-meisters, and their fluff-headed misconceptions about biology are just painful to listen to.

Anyway, as long as I'm giving speeches, I might as well try to make the content educational as I'm learning the form.

Oclarki · 19 June 2011

Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail. The second law of thermodynamics would prohibit lizards turning into birds.
Actually, the "theory of evolution" would not fail at all. Quite the opposite. Eliminate interaction between an organism and its surroundings and you eliminate natural selection. A reasonable prediction derived from the "theory of evolution" is that elimination of natural selection would result in....no evolution.

Eric Finn · 19 June 2011

Oclarki said:
Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail. The second law of thermodynamics would prohibit lizards turning into birds.
Actually, the "theory of evolution" would not fail at all. Quite the opposite. Eliminate interaction between an organism and its surroundings and you eliminate natural selection. A reasonable prediction derived from the "theory of evolution" is that elimination of natural selection would result in....no evolution.
You have a good point here. A similar point was raised by my namesake eric earlier. The predictions of the ToE would still comply with observations.

Dave Wisker · 19 June 2011

Oclarki said:
Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail. The second law of thermodynamics would prohibit lizards turning into birds.
Actually, the "theory of evolution" would not fail at all. Quite the opposite. Eliminate interaction between an organism and its surroundings and you eliminate natural selection. A reasonable prediction derived from the "theory of evolution" is that elimination of natural selection would result in....no evolution.
Not true. In the absence of natural selection, evolution (i.e., changes in allelic frequencies within a population) will continue to occur due to mutation, genetic drift, and immigration/emigration.

John Kwok · 19 June 2011

Dave Wisker said:
Oclarki said:
Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail. The second law of thermodynamics would prohibit lizards turning into birds.
Actually, the "theory of evolution" would not fail at all. Quite the opposite. Eliminate interaction between an organism and its surroundings and you eliminate natural selection. A reasonable prediction derived from the "theory of evolution" is that elimination of natural selection would result in....no evolution.
Not true. In the absence of natural selection, evolution (i.e., changes in allelic frequencies within a population) will continue to occur due to mutation, genetic drift, and immigration/emigration.
Agreed, especially as noted here, which discusses "leaky genes" as a means of fostering "fast track" evolution: http://www.sciencedaily.com/releases/2011/06/110615161758.htm

Stanton · 19 June 2011

Dave Wisker said:
Oclarki said:
Eric Finn said: In order not to be totally off-topic, I would like to introduce a biological system without interactions (between individuals or between individuals and their environment). My claim is that under these conditions the theory of evolution will fail. The second law of thermodynamics would prohibit lizards turning into birds.
Actually, the "theory of evolution" would not fail at all. Quite the opposite. Eliminate interaction between an organism and its surroundings and you eliminate natural selection. A reasonable prediction derived from the "theory of evolution" is that elimination of natural selection would result in....no evolution.
Not true. In the absence of natural selection, evolution (i.e., changes in allelic frequencies within a population) will continue to occur due to mutation, genetic drift, and immigration/emigration.
Oclarki is implying that, if an organism or a population of organisms stop interacting with the environment, they can no longer evolve. Evolution requires the ability to reproduce, and reproduction, sexual or asexual, requires the ability to interact with the environment, especially to take in nutrients to produce and nourish the offspring. Short of turning into an intangible, invisible ghost, or turning into a magic statue, the only two states an organism can enter into that come closest to not interacting with the environment are death and dormancy. Even so, a dead organism still interacts with the environment, i.e., decomposition and having the corpse raided by other organisms for food. And a dormant organism still reacts to special environmental cues in order to become active again.

Richard · 19 June 2011

A biolgical system with no interactions between individuals or between individuals and their environment. If there is no interaction with other individuals or the environment how can there be evolution. Isn't there supposed to be some reproduction in there somewhere? What is the organism's source of energy? How do you sustain generations of organisms without interactions with the environment?

mrg · 19 June 2011

Richard said: A biolgical system with no interactions between individuals ...
I think you are suffering from an irony deficiency.

Richard · 19 June 2011

Mrg - Is this not how Eric Finn defined his system? I think he did. I am just commenting on his definition. Personally, I don't think there is such a thing any more than there is a spherical cow of uniform density. Of course,he could be joking and I missed the punch like completely.

Dave Wisker · 19 June 2011

Evolution requires the ability to reproduce, and reproduction, sexual or asexual, requires the ability to interact with the environment, especially to take in nutrients to produce and nourish the offspring.
Understood. But let's look at this statement:
A reasonable prediction derived from the “theory of evolution” is that elimination of natural selection would result in.…no evolution.
Whether we are considering the inane hypothetical of organisms that don't interact with their surroundings or not, it is not a reasonable prediction from the theory of evolution that there can be no evolution without natural selection.

mrg · 19 June 2011

Richard said: Of course,he could be joking and I missed the punch like completely.
Hold that thought.

Richard · 19 June 2011

OK - got me! :)

Stanton · 19 June 2011

Dave Wisker said: ...let's look at this statement:
A reasonable prediction derived from the “theory of evolution” is that elimination of natural selection would result in.…no evolution.
Whether we are considering the inane hypothetical of organisms that don't interact with their surroundings or not, it is not a reasonable prediction from the theory of evolution that there can be no evolution without natural selection.
That aspect, I'm in total agreement with you. Even species that reproduce via clones can evolve, albeit very slowly, due to the accumulation of mutations.

Stanton · 19 June 2011

mrg said:
Richard said: Of course,he could be joking and I missed the punch like completely.
Hold that thought.
I'd prefer you'd hold that duck, instead.

stevaroni · 19 June 2011

Whether we are considering the inane hypothetical of organisms that don't interact with their surroundings or not, it is not a reasonable prediction from the theory of evolution that there can be no evolution without natural selection.
Strikes me there would always be some natural selection. Aside from clonal organisms or some kind of plant that can only breed with it's immediate neighbor, there's always going to be some sort of sexual selection in any macro plant or animal, even if only at the "let my spores fight it out" level. More importantly, the most important thing natural selection will always do is remove the really harmful mutations - those that break something so badly that the organism doesn't live long enough to breed - from the gene pool.

Just Bob · 19 June 2011

In other words, evolution, not being forbidden, is in fact COMPULSORY.

Dave Wisker · 19 June 2011

stevaroni said:
Whether we are considering the inane hypothetical of organisms that don't interact with their surroundings or not, it is not a reasonable prediction from the theory of evolution that there can be no evolution without natural selection.
Strikes me there would always be some natural selection. Aside from clonal organisms or some kind of plant that can only breed with it's immediate neighbor, there's always going to be some sort of sexual selection in any macro plant or animal, even if only at the "let my spores fight it out" level. More importantly, the most important thing natural selection will always do is remove the really harmful mutations - those that break something so badly that the organism doesn't live long enough to breed - from the gene pool.
That's true, of course. But the point I am trying to make is this: an allele’s frequency in a population can change even if that particular variant conveys no reproductive advantage over its variants whatsoever. For example, consider a population of 50 individuals, 25 of whom are homozygous at a locus for allele A and 25 homozygous for a variant allele a. The frequency of A is thus 50%. Now, one day an A individual accidentally walks off a cliff in the dark. There are now 24 individuals homozygous for A and 25 homozygous for a. The frequency of A has now dropped to ~ 49%, and A’s frequency has increased for a reason that has nothing to do with the differential reproductive capacity of the allele a over A. Evolution has occurred in the population with respect to A and a without being due to natural selection. But let’s consider another scenario, a bit closer to what I think you were trying to convey. Take the same alleles and starting frequencies as before, only this time one of the A homozygotes has inherited a spontaneous mutation at a different locus on another chromosome which results in death before maturity. The resulting frequencies for A and a in the population are identical to the previous scenario. Does this mean the change in allelic frequencies at the A/a locus is due to natural selection, even though change had nothing to do with the differential reproductive capacities of the alleles?

Dave Wisker · 21 June 2011

Correction:

"The frequency of A has now dropped to ~ 49%, and a’s frequency has increased

Just Bob · 21 June 2011

Question for the biologists: How frequent are mutations that are NOT the result of outside influences (chemicals, radiation, etc.)? Are there some organisms that are more prone to such purely "intramural" mutations than other critters?

Dave Wisker · 21 June 2011

Just Bob said: Question for the biologists: How frequent are mutations that are NOT the result of outside influences (chemicals, radiation, etc.)? Are there some organisms that are more prone to such purely "intramural" mutations than other critters?
The frequency varies, and for different reasons. Areas of the genome with extensive repeats (microsatellites, for example) are more prone to inserts and deletions than other areas. Chromosome rearrangement mutations involve chromosome breakage, and breaks tend to occur more often in areas with repeats. So some areas of the genome are mutational "hotspots", while others are not. In humans, I think I read that the mutation rate for chromosome rearrangements is 10^-3 to 10^-4 per gamete. DNA Polymerase, the enzyme that replicates DNA is not 100% accurate and makes spontaneous errors, as do the DNA proofreading processes. In the bacterium E.coli the overall error rate for DNA replication is something like 10^-10 nucleotides per replication. The rate is similar in eukaryotes (like fruit flies and mammals), I think. There may be species-to-species differences, but I can't think of any off the top of my head.

Dave Lovell · 21 June 2011

Dave Wisker said: For example, consider a population of 50 individuals, 25 of whom are homozygous at a locus for allele A and 25 homozygous for a variant allele a. The frequency of A is thus 50%. Now, one day an A individual accidentally walks off a cliff in the dark. There are now 24 individuals homozygous for A and 25 homozygous for a. The frequency of A has now dropped to ~ 49%, and A’s frequency has increased for a reason that has nothing to do with the differential reproductive capacity of the allele a over A. Evolution has occurred in the population with respect to A and a without being due to natural selection.
Surely you can only make that assertion if you know the allele does not predispose an individual carrying it to nocturnal perambulation! :)

Dave Wisker · 21 June 2011

Dave Lovell said:
Surely you can only make that assertion if you know the allele does not predispose an individual carrying it to nocturnal perambulation! :)
I think that was the idea, yes ;)

dornier.pfeil · 22 June 2011

Off topic I know, and a dead off topic too, but,
mrg Not always. The DH Mosquito didn’t have “handed” engines. The P-38 Lightning did … one of the consequences of this was that if it lost an engine on takeoff, a pilot who didn’t know how to react was likely to try to compensate by revving up the live engine, which would flip the aircraft over on its back.
Another solution to the problem of engine torque that is near and dear to me is the twin tandem-tractor/pusher (or fore and aft) engine layout. This layout is rare and only one aircraft could be regarded as having been genuinely successful in service production with it. mrg, You may enjoy this study. http://www.me.wustl.edu/~aiaa/AIAA_2001_Nov_85x11.pdf

mrg · 22 June 2011

dornier.pfeil said: This layout is rare and only one aircraft could be regarded as having been genuinely successful in service production with it.
Oh yes, the Skymaster is very interesting. When I was down at Fort Hood in the 1970s I'd see one on occasion circling over the range area during exercises; moments later a strike fighter would pounce on some position spotted by the air controllers. I've got a prototype document for my Air Vectors page on German twin-engine fighters: Bf-110, the dreadful Me-210, Me-410, Hornisse, and Do-335. Don't know when I'll complete it. END OT.